Publications: Tan, Cong

Journal Article

Wang, Y., Xu, Y., Gupta, S.ORCID: 0000-0002-4948-4689, Zhou, Y., Wallwork, H., Zhou, G., Broughton, S., Zhang, X-Q, Tan, C., Westcott, S., Moody, D., Sun, D., Loughman, R., Zhang, W. and Li, C. (2020) Fine mapping QSc.VR4, an effective and stable scald resistance locus in barley (Hordeum vulgare L.), to a 0.38-Mb region enriched with LRR-RLK and GLP genes. Theoretical and Applied Genetics .

Jia, Y., Westcott, S., He, T., McFawn, L.A., Angessa, T., Hill, C.ORCID: 0000-0002-6754-5553, Tan, C., Zhang, X., Zhou, G. and Li, C. (2020) Genome-wide association studies reveal QTL hotspots for grain brightness and black point traits in barley. The Crop Journal . In Press.

Jia, Y., Selva, C., Zhang, Y., Li, B., McFawn, L.A., Broughton, S., Zhang, X., Westcott, S., Wang, P., Tan, C., Angessa, T., Xu, Y., Whitford, R. and Li, C. (2020) Uncovering the evolutionary origin of blue anthocyanins in cereal grains. The Plant Journal, 101 (5). pp. 1057-1074.

Hua, W., Tan, C., Xie, J., Zhu, J., Shang, Y., Yang, J., Zhang, X-Q, Wu, X., Wang, J. and Li, C. (2019) Alternative splicing of a barley gene results in an excess-tillering and semi-dwarf mutant. Theoretical and Applied Genetics . In Press.

Tan, C., Zhang, X-Q, Wang, Y., Wu, D., Bellgard, M.I., Xu, Y., Shu, X., Zhou, G. and Li, C. (2019) Characterization of genome-wide variations induced by gamma-ray radiation in barley using RNA-Seq. BMC Genomics, 20 (1).

Hua, W., Tan, C., Xie, J., Zhu, J., Shang, Y., Yang, J., Zhang, X-Q, Wu, X., Wang, J. and Li, C. (2019) Correction to: Alternative splicing of a barley gene results in an excess‑tillering and semi‑dwarf mutant. Theoretical and Applied Genetics . In Press.

Long, Z., Jia, Y., Tan, C., Zhang, X-Q, Angessa, T., Broughton, S., Westcott, S., Dai, F., Zhang, G., Sun, D., Xu, Y. and Li, C. (2019) Genetic mapping and evolutionary analyses of the black grain trait in barley. Frontiers in Plant Science, 9 .

Hill, C.B.ORCID: 0000-0002-6754-5553, Angessa, T.T., McFawn, L-A, Wong, D., Tibbits, J., Zhang, X-Q, Forrest, K., Moody, D., Telfer, P., Westcott, S., Diepeveen, D.ORCID: 0000-0002-1535-8019, Xu, Y., Tan, C., Hayden, M. and Li, C. (2018) Hybridisation-based target enrichment of phenology genes to dissect the genetic basis of yield and adaptation in barley. Plant Biotechnology Journal, 17 (5). pp. 932-944.

Prade, V.M., Gundlach, H., Twardziok, S., Chapman, B., Tan, C., Langridge, P., Schulman, A.H., Stein, N., Waugh, R., Zhang, G., Platzer, M., Li, C., Spannagl, M. and Mayer, K.F.X. (2018) The pseudogenes of barley. The Plant Journal, 93 (3). pp. 502-514.

Wang, R., Yang, F., Zhang, X-Q, Wu, D., Tan, C., Westcott, S., Broughton, S., Li, C., Zhang, W. and Xu, Y. (2017) Characterization of a Thermo-Inducible Chlorophyll-deficient mutant in barley. Frontiers in Plant Science, 8 .

Beier, S., Himmelbach, A., Colmsee, C., Zhang, X-Q, Barrero, R.A., Zhang, Q., Li, L., Bayer, M., Bolser, D., Taudien, S., Groth, M., Felder, M., Hastie, A., Šimková, H., Staňková, H., Vrána, J., Chan, S., Muñoz-Amatriaín, M., Ounit, R., Wanamaker, S., Schmutzer, T., Aliyeva-Schnorr, L., Grasso, S., Tanskanen, J., Sampath, D., Heavens, D., Cao, S., Chapman, B., Dai, F., Han, Y.ORCID: 0000-0001-6480-0398, Li, H., Li, X., Lin, C., McCooke, J.K., Tan, C., Wang, S., Yin, S., Zhou, G., Poland, J.A., Bellgard, M.I., Houben, A., Doležel, J., Ayling, S., Lonardi, S., Langridge, P., Muehlbauer, G.J., Kersey, P., Clark, M.D., Caccamo, M., Schulman, A.H., Platzer, M., Close, T.J., Hansson, M., Zhang, G., Braumann, I., Li, C., Waugh, R., Scholz, U., Stein, N. and Mascher, M. (2017) Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data, 4 . Article number: 170044.

Mascher, M., Gundlach, H., Himmelbach, A., Beier, S., Twardziok, S.O., Wicker, T., Radchuk, V., Dockter, C., Hedley, P.E., Russell, J., Bayer, M., Ramsay, L., Liu, H., Haberer, G., Zhang, X-Q, Zhang, Q., Barrero, R.A., Li, L., Taudien, S., Groth, M., Felder, M., Hastie, A., Šimková, H., Staňková, H., Vrána, J., Chan, S., Muñoz-Amatriaín, M., Ounit, R., Wanamaker, S., Bolser, D., Colmsee, C., Schmutzer, T., Aliyeva-Schnorr, L., Grasso, S., Tanskanen, J., Chailyan, A., Sampath, D., Heavens, D., Clissold, L., Cao, S., Chapman, B., Dai, F., Han, Y.ORCID: 0000-0001-6480-0398, Li, H., Li, X., Lin, C., McCooke, J.K., Tan, C., Wang, P., Wang, S., Yin, S., Zhou, G., Poland, J.A., Bellgard, M.I., Borisjuk, L., Houben, A., Doležel, J., Ayling, S., Lonardi, S., Kersey, P., Langridge, P., Muehlbauer, G.J., Clark, M.D., Caccamo, M., Schulman, A.H., Mayer, K.F.X., Platzer, M., Close, T.J., Scholz, U., Hansson, M., Zhang, G., Braumann, I., Spannagl, M., Li, C., Waugh, R. and Stein, N. (2017) A chromosome conformation capture ordered sequence of the barley genome. Nature, 544 (7651). pp. 427-433.

Zhang, Q., Zhang, X-Q, Wang, S., Tan, C., Zhou, G. and Li, C. (2016) Involvement of alternative splicing in barley seed germination. PLoS ONE, 11 (3). Article e0152824.

Jia, Q., Tan, C., Wang, J., Zhang, X-Q, Zhu, J., Luo, H., Yang, J., Westcott, S., Broughton, S, Moody, D. and Li, C. (2016) Marker development using SLAF-seq and whole-genome shotgun strategy to fine-map the semi-dwarf gene ari-e in barley. BMC Genomics, 17 (1).

Yang, H., Jian, J., Li, X., Renshaw, D., Clements, J., Sweetingham, M.W., Tan, C. and Li, C. (2015) Application of whole genome re-sequencing data in the development of diagnostic DNA markers tightly linked to a disease-resistance locus for marker-assisted selection in lupin (Lupinus angustifolius). BMC Genomics, 16 (1).

Zhou, G., Zhang, Q., Zhang, X-Q, Tan, C. and Li, C. (2015) Construction of high-density genetic map in barley through restriction-site associated DNA sequencing. PloS one, 10 (7). e0133161.

Zhou, G., Zhang, Q., Tan, C., Zhang, X-Q and Li, C. (2015) Development of genome-wide InDel markers and their integration with SSR, DArT and SNP markers in single barley map. BMC Genomics, 16 (1).

Thesis

Tan, Cong (2018) Exploring genomic diversity in wild and cultivated barley using high throughput DNA sequencing technology. PhD thesis, Murdoch University.