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Publications: Nicholson, Jeremy

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Number of items: 21.

Journal Article

Barbas-Bernardos, C., Garcia-Perez, I., Lorenzo, M.P., Alonso-Herranz, V., Nicholson, J. and Garcia, A. (2020) Development and validation of a high performance liquid chromatography-tandem mass spectrometry method for the absolute analysis of 17 α D-amino acids in cooked meals. Journal of Chromatography A, 1611 . Art. 460598.

Garcia-Perez, I., Posma, J.M., Serrano-Contreras, J.I., Boulangé, C.L., Chan, Q., Frost, G., Stamler, J., Elliott, P., Lindon, J.C., Holmes, E. and Nicholson, J.K. (2020) Identifying unknown metabolites using NMR-based metabolic profiling techniques. Nature Protocols, 15 . pp. 2538-2567.

Vonhof, E.V., Piotto, M., Holmes, E., Lindon, J.C., Nicholson, J.K. and Li, J.V. (2020) Improved spatial resolution of metabolites in tissue biopsies using high-resolution Magic-Angle-Spinning slice localization NMR spectroscopy. Analytical Chemistry, 92 (17). pp. 11516-11519.

Kimhofer, T., Lodge, S., Whiley, L.ORCID: 0000-0002-9088-4799, Gray, N., Loo, R.L., Lawler, N.G., Nitschke, P., Bong, S-H, Morrison, D.L., Begum, S., Richards, T., Yeap, B.B., Smith, C., Smith, K.G.C., Holmes, E. and Nicholson, J.K. (2020) Integrative modeling of quantitative plasma lipoprotein, metabolic, and amino acid data reveals a multiorgan pathological signature of SARS-CoV-2 infection. Journal of Proteome Research .

West, K.A., Kanu, C., Maric, T., McDonald, J.A.K., Nicholson, J.K., Li, J.V., Johnson, M.R, Holmes, E. and Savvidou, M.D. (2020) Longitudinal metabolic and gut bacterial profiling of pregnant women with previous bariatric surgery. Gut, 69 (8). pp. 1452-1459.

Koundouros, N., Karali, E., Tripp, A., Valle, A., Inglese, P., Perry, N.J.S., Magee, D.J., Anjomani Virmouni, S., Elder, G.A., Tyson, A.L., Dória, M.L., van Weverwijk, A., Soares, R.F., Isacke, C.M., Nicholson, J.K., Glen, R.C., Takats, Z. and Poulogiannis, G. (2020) Metabolic Fingerprinting Links Oncogenic PIK3CA with Enhanced Arachidonic Acid-Derived Eicosanoids. Cell, 181 (7). 1596-1611.e27.

Letertre, M., Munjoma, N.C., Slade, S.E., Plumb, R.S., Swann, J., Coen, M., Nicholson, J.K. and Wilson, I.D. (2020) Metabolic phenotyping using UPLC–MS and rapid microbore UPLC–IM–MS: Determination of the effect of different dietary regimes on the urinary metabolome of the Rat. Chromatographia .

Posma, J.M., Garcia-Perez, I., Frost, G., Aljuraiban, G.S., Chan, Q., Van Horn, L., Daviglus, M., Stamler, J., Holmes, E., Elliott, P. and Nicholson, J.K. (2020) Nutriome–metabolome relationships provide insights into dietary intake and metabolism. Nature Food, 1 (7). pp. 426-436.

Letertre, M.P.M., Munjoma, N., Wolfer, K., Pechlivanis, A., McDonald, J.A.K., Hardwick, R.N., Cherrington, N.J., Coen, M., Nicholson, J.K., Hoyles, L., Swann, J.R. and Wilson, I.D. (2020) A Two-Way interaction between Methotrexate and the Gut Microbiota of Male Sprague–Dawley Rats. Journal of Proteome Research, 19 (8). pp. 3326-3339.

Shen, E.Y-L, Abellona, U., Taylor-Robinson, S., Thursz, M., Holmes, E. and Nicholson, J. (2019) Abstract 5269: Discovery and validation of plasma acylcarnitines for the early diagnosis of hepatocellular carcinoma. Cancer Research, 79 (13). p. 5269.

McGill, D., Chekmeneva, E., Lindon, J.C., Takats, Z. and Nicholson, J.K. (2019) Application of novel solid phase extraction-NMR protocols for metabolic profiling of human urine. Faraday Discussions, 218 . pp. 395-416.

Seow, W.J., Shu, X-O, Nicholson, J.K., Holmes, E., Walker, D.I., Hu, W., Cai, Q., Gao, Y-T, Xiang, Y-B, Moore, S.C., Bassig, B.A., Wong, J.Y.Y., Zhang, J., Ji, B-T, Boulangé, C.L., Kaluarachchi, M., Wijeyesekera, A., Zheng, W., Elliott, P., Rothman, N. and Lan, Q. (2019) Association of untargeted urinary metabolomics and lung cancer risk among never-smoking women in China. JAMA Network Open, 2 (9).

Nye, L.C., Williams, J.P., Munjoma, N.C., Letertre, M.P.M., Coen, M., Bouwmeester, R., Martens, L., Swann, J.R., Nicholson, J.K., Plumb, R.S., McCullagh, M., Gethings, L.A., Lai, S., Langridge, J.I., Vissers, J.P.C. and Wilson, I.D. (2019) A Comparison of Collision Cross Section Values Obtained via Travelling Wave Ion Mobility-Mass Spectrometry and Ultra High Performance Liquid Chromatography-Ion Mobility-Mass Spectrometry: Application to the Characterisation of Metabolites in Rat Urine. Journal of Chromatography A, 1602 . pp. 386-396.

Kundu, P., Lee, H.U., Garcia-Perez, I., Tay, E.X.Y., Kim, H., Faylon, L.E., Martin, K.A., Purbojati, R., Drautz-Moses, D.I., Ghosh, S., Nicholson, J.K., Schuster, S., Holmes, E. and Pettersson, S. (2019) Neurogenesis and prolongevity signaling in young germ-free mice transplanted with the gut microbiota of old mice. Science Translational Medicine, 11 (518).

Whiley, L.ORCID: 0000-0002-9088-4799, Chekmeneva, E., Berry, D.J., Jiménez, B., Yuen, A.H.Y., Salam, A., Hussain, H., Witt, M., Takats, Z., Nicholson, J. and Lewis, M.R. (2019) Systematic isolation and structure elucidation of urinary metabolites optimized for the analytical-scale molecular profiling laboratory. Analytical Chemistry, 91 (14). pp. 8873-8882.

Brial, F., Le Lay, A., Hedjazi, L., Tsang, T., Fearnside, J.F., Otto, G.W., Alzaid, F., Wilder, S.P., Venteclef, N., Cazier, J-B, Nicholson, J.K., Day, C., Burt, A.D., Gut, I.G., Lathrop, M., Dumas, M-E and Gauguier, D. (2019) Systems genetics of Hepatic Metabolome Reveals Octopamine as a Target for Non-Alcoholic Fatty Liver Disease Treatment. Scientific Reports, 9 (1).

Whiley, L.ORCID: 0000-0002-9088-4799, Nye, L.C., Grant, I., Andreas, N., Chappell, K.E., Sarafian, M.H., Misra, R., Plumb, R.S., Lewis, M.R., Nicholson, J.K., Holmes, E., Swann, J.R. and Wilson, I.D. (2019) Ultrahigh-performance liquid chromatography tandem mass spectrometry with electrospray ionization quantification of tryptophan metabolites and markers of gut health in serum and plasma — Application to clinical and epidemiology cohorts. Analytical Chemistry, 91 (8). pp. 5207-5216.

Lahiri, S., Kim, H., Garcia-Perez, I., Reza, M.M., Martin, K.A., Kundu, P., Cox, L.M., Selkrig, J., Posma, J.M., Zhang, H., Padmanabhan, P., Moret, C., Gulyás, B., Blaser, M.J., Auwerx, J., Holmes, E., Nicholson, J., Wahli, W. and Pettersson, S. (2019) The gut microbiota influences skeletal muscle mass and function in mice. Science Translational Medicine, 11 (502).

Everett, J.R., Holmes, E., Veselkov, K.A., Lindon, J.C. and Nicholson, J.K. (2019) A unified conceptual framework for metabolic phenotyping in diagnosis and prognosis. Trends in Pharmacological Sciences, 40 (10). pp. 763-773.

Domingo-Almenara, X., Montenegro-Burke, J.R., Ivanisevic, J., Thomas, A., Sidibé, J., Teav, T., Guijas, C., Aisporna, A.E., Rinehart, D., Hoang, L., Nordström, A., Gómez-Romero, M., Whiley, L.ORCID: 0000-0002-9088-4799, Lewis, M.R., Nicholson, J.K., Benton, H.P. and Siuzdak, G. (2018) XCMS-MRM and METLIN-MRM: A cloud library and public resource for targeted analysis of small molecules. Nature Methods, 15 (9). pp. 681-684.

Gray, N., Plumb, R.S., Wilson, I.D. and Nicholson, J.K. (2018) A validated UPLC-MS/MS assay for the quantification of amino acids and biogenic amines in rat urine. Journal of Chromatography B, 1106 . pp. 50-57.

This list was generated on Wed Oct 28 17:21:06 2020 UTC.