Publications: Abraham, Sam

Journal Article

Stevens, A.J., Abraham, R., Young, K.A., Russell, C.C., McCluskey, S.N., Baker, J.R., Rusdi, B., Page, S.W., O'Handley, R., O'Dea, M.ORCID: 0000-0002-2757-7585, Abraham, S. and McCluskey, A. (2022) Antigiardial activity of novel guanidine compounds. ChemMedChem . Early View.

Abraham, R., Sahibzada, S.ORCID: 0000-0001-7362-8323, Jordan, D., O'Dea, M.ORCID: 0000-0002-2757-7585, Hampson, D.J.ORCID: 0000-0002-7729-0427, McMillan, K., Duffy, L., Mellor, G., Barlow, R. and Abraham, S. (2022) Antimicrobial resistance and genomic relationships of Salmonella enterica from Australian cattle. International Journal of Food Microbiology, 371 . Article 109672.

Alhamami, T., Low, W.Y., Ren, Y., Taylor, K., Khazandi, M., Veltman, T., Venter, H., Carr, M., Turni, C., Abraham, S. and Trott, D.J. (2022) Antimicrobial susceptibility and genomic analysis of Histophilus somni isolated from cases of bovine respiratory disease in Autralian feedlot cattle. Veterinary Microbiology, 270 . Art. 109460.

Alhamami, T., Roy Chowdhury, P., Gomes, N., Carr, M., Veltman, T., Khazandi, M., Mollinger, J., Deutscher, A.T., Turni, C., Mahdi, L., Venter, H., Abraham, S., Djordjevic, S.P. and Trott, D.J. (2022) Correction: Alhamami et al. First emergence of resistance to macrolides and tetracycline identified in Mannheimia haemolytica and Pasteurella multocida isolates from beef feedlots in Australia. Microorganisms 2021, 9, 1322. Microorganisms, 10 (4). Article 825.

Mayfosh, A.J., Day, Z.I., Unsworth, N.B., Liu, C-Q, Gupta, R., Haynes, S., Abraham, R., Abraham, S., Shaw, Z.L., Walia, S., Elbourne, A., Hulett, M.D. and Rau, T.F. (2022) GS-2: A novel broad-spectrum agent for environmental microbial control. Biomolecules, 12 (9). Article 1293.

Laird, T., Abraham, R., Sahibzada, S.ORCID: 0000-0001-7362-8323, Abraham, S. and O’Dea, M.ORCID: 0000-0002-2757-7585 (2022) In Vitro demonstration of targeted phage therapy and competitive exclusion as a novel strategy for decolonization of Extended-Spectrum-Cephalosporin-Resistant Escherichia coli. Applied and Environmental Microbiology, 88 (7). Art. aem.02276-21.

Barlow, R., McMillan, K., Mellor, G., Duffy, L., Jordan, D., Abraham, R., O'Dea, M.ORCID: 0000-0002-2757-7585, Sahibzada, S.ORCID: 0000-0001-7362-8323 and Abraham, S. (2022) Phenotypic and genotypic assessment of antimicrobial resistance in Escherichia coli from Australian cattle populations at Slaughter. Journal of Food Protection, 85 (4). pp. 563-570.

Asuming-Bediako, N., Kunadu, A.P-H, Jordan, D., Abraham, S. and Habib, I. (2022) Prevalence and antimicrobial susceptibility pattern of Campylobacter jejuni in raw retail chicken meat in Metropolitan Accra, Ghana. International Journal of Food Microbiology, 376 . Art. 109760.

Lee, T.ORCID: 0000-0003-3333-0076, Pang, S., Daley, D.A., Pearson, J.C., Abraham, S. and Coombs, G.W.ORCID: 0000-0003-1635-6506 (2022) The changing molecular epidemiology of Enterococcus faecium harbouring the van operon at a teaching hospital in Western Australia: A fifteen-year retrospective study. International Journal of Medical Microbiology, 312 (1). Art. 151546.

Veltman, T., Jordan, D., McDevitt, C.A., Bell, J., Howden, B.P., Valcanis, M., O'Dea, M.ORCID: 0000-0002-2757-7585, Abraham, S., Scott, P., Kovac, J.H., Chia, R., Combs, B., Chousalkar, K., Wilson, T. and Trott, D.J. (2021) Absence of high priority critically important antimicrobial resistance in Salmonella sp. isolated from Australian commercial egg layer environments. International Journal of Food Microbiology, 340 . Art.109042.

Sodagari, H.R., Wang, P., Robertson, I.ORCID: 0000-0002-4255-4752, Abraham, S., Sahibzada, S.ORCID: 0000-0001-7362-8323 and Habib, I. (2021) Antimicrobial resistance and genomic characterisation of Escherichia coli isolated from caged and non-caged retail table eggs in Western Australia. International Journal of Food Microbiology, 340 . Article 109054.

Lee, T.ORCID: 0000-0003-3333-0076, Jordan, D., Sahibzada, S.ORCID: 0000-0001-7362-8323, Abraham, R., Pang, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, O’Dea, M.ORCID: 0000-0002-2757-7585 and Abraham, S. (2021) Antimicrobial resistance in porcine enterococci in Australia and the ramifications for human health. Applied and Environmental Microbiology, 87 (10). e03037-20.

Laird, T.J., Jordan, D., Lee, Z.Z., O’Dea, M.ORCID: 0000-0002-2757-7585, Stegger, M., Truswell, A., Sahibzada, S.ORCID: 0000-0001-7362-8323, Abraham, R. and Abraham, S. (2021) Diversity detected in commensals at host and farm level reveals implications for national antimicrobial resistance surveillance programmes. Journal of Antimicrobial Chemotherapy, 77 (2). pp. 400-408.

Gunasekera, S., Abraham, S., Stegger, M., Pang, S., Wang, P., Sahibzada, S.ORCID: 0000-0001-7362-8323 and O’Dea, M.ORCID: 0000-0002-2757-7585 (2021) Evaluating coverage bias in next-generation sequencing of Escherichia coli. PLoS ONE, 16 (6). Art. e0253440.

Alhamami, T., Chowdhury, P.R., Gomes, N., Carr, M., Veltman, T., Khazandi, M., Mollinger, J., Deutscher, A.T., Turni, C., Mahdi, L., Venter, H., Abraham, S., Djordjevic, S.P. and Trott, D.J. (2021) First emergence of resistance to macrolides and tetracycline identified in Mannheimia haemolytica and Pasteurella multocida isolates from beef feedlots in Australia. Microorganisms, 9 (6). Article 1322.

Aleri, J.W., Sahibzada, S.ORCID: 0000-0001-7362-8323, Harb, A., Fisher, A.D., Waichigo, F.K., Lee, T.ORCID: 0000-0003-3333-0076, Robertson, I.D.ORCID: 0000-0002-4255-4752 and Abraham, S. (2021) Molecular epidemiology and antimicrobial resistance profiles of Salmonella isolates from dairy heifer calves and adult lactating cows in a Mediterranean pasture-based system of Australia. Journal of Dairy Science, 105 (2). P1493-P1503.

Rynhoud, H., Forde, B.M., Beatson, S.A., Abraham, S., Meler, E., Soares Magalhães, R.J. and Gibson, J.S. (2021) Molecular epidemiology of clinical and colonizing Methicillin-Resistant staphylococcus isolates in companion animals. Frontiers in Veterinary Science, 8 . Art. 620491.

Laird, T.J., Abraham, S., Jordan, D., Pluske, J.R.ORCID: 0000-0002-7194-2164, Hampson, D.J.ORCID: 0000-0002-7729-0427, Trott, D.J. and O’Dea, M.ORCID: 0000-0002-2757-7585 (2021) Porcine enterotoxigenic Escherichia coli: Antimicrobial resistance and development of microbial-based alternative control strategies. Veterinary Microbiology, 258 . Article 109117.

Truswell, A., Abraham, R., O’Dea, M.ORCID: 0000-0002-2757-7585, Lee, Z.Z., Lee, T., Laird, T., Blinco, J., Kaplan, S., Turnidge, J., Trott, D.J., Jordan, D. and Abraham, S. (2021) Robotic Antimicrobial Susceptibility Platform (RASP): A next-generation approach to One Health surveillance of antimicrobial resistance. Journal of Antimicrobial Chemotherapy, 76 (7). pp. 1800-1807.

Harb, A., Abraham, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Hantosh, H.A., Jordan, D. and Habib, I. (2021) Sociodemographic determinants of healthcare-seeking options and alternative management practices of childhood diarrheal illness: A household survey among mothers in Iraq. The American Journal of Tropical Medicine and Hygiene, 104 (2). pp. 748-755.

Lee, Z.Z., Abraham, R., O’Dea, M.ORCID: 0000-0002-2757-7585, Harb, A., Hunt, K., Lee, T.ORCID: 0000-0003-3333-0076, Abraham, S., Jordan, D. and Powell, E.A. (2021) Validation of selective agars for detection and quantification of Escherichia coli strains resistant to critically important antimicrobials. Microbiology Spectrum, 9 (3). Art. e00664-21.

O’Dea, M.ORCID: 0000-0002-2757-7585, Abraham, R.J., Sahibzada, S.ORCID: 0000-0001-7362-8323, Lee, T., Jordan, D., Laird, T., Pang, S., Buller, N., Stegger, M., Coombs, G.W.ORCID: 0000-0003-1635-6506, Trott, D.J. and Abraham, S. (2020) Antimicrobial resistance and genomic insights into bovine mastitis-associated Staphylococcus aureus in Australia. Veterinary Microbiology, 250 . Article 108850.

Kidsley, A.K., White, R.T., Beatson, S.A., Saputra, S., Schembri, M.A., Gordon, D., Johnson, J.R., O’Dea, M.ORCID: 0000-0002-2757-7585, Mollinger, J.L., Abraham, S. and Trott, D.J. (2020) Companion animals are spillover hosts of the Multidrug-resistant human extraintestinal escherichia coli pandemic Clones ST131 and ST1193. Frontiers in Microbiology, 11 . Art. 1968.

Abraham, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Sahibzada, S.ORCID: 0000-0001-7362-8323, Hewson, K., Pavic, A., Veltman, T., Abraham, R., Harris, T., Trott, D.J. and Jordan, D. (2020) Correction: Escherichia coli and Salmonella spp. isolated from Australian meat chickens remain susceptible to critically important antimicrobial agents. PLOS ONE, 15 (10). e0227383.

Abraham, S., Sahibzada, S.ORCID: 0000-0001-7362-8323, Hewson, K., Laird, T., Abraham, R., Pavic, A., Truswell, A., Lee, T., O’Dea, M.ORCID: 0000-0002-2757-7585 and Jordan, D. (2020) Emergence of fluoroquinolone-resistant Campylobacter jejuni and Campylobacter coli among Australian chickens in the absence of fluoroquinolone use. Applied and Environmental Microbiology, 86 (8). e02765.

Kidsley, A.K., O’Dea, M.ORCID: 0000-0002-2757-7585, Ebrahimie, E., Mohammadi-Dehcheshmeh, M., Saputra, S., Jordan, D., Johnson, J.R., Gordon, D., Turni, C., Djordjevic, S.P., Abraham, S. and Trott, D.J. (2020) Genomic analysis of fluoroquinolone-susceptible phylogenetic group B2 extraintestinal pathogenic Escherichia coli causing infections in cats. Veterinary Microbiology, 245 . Art. 108685.

Kidsley, A.K., O’Dea, M.ORCID: 0000-0002-2757-7585, Saputra, S., Jordan, D., Johnson, J.R., Gordon, D.M., Turni, C., Djordjevic, S.P., Abraham, S. and Trott, D.J. (2020) Genomic analysis of phylogenetic group B2 extraintestinal pathogenic E. coli causing infections in dogs in Australia. Veterinary Microbiology, 248 . Art.108783.

Mukerji, S., Gunasekera, S., Dunlop, J.N., Stegger, M., Jordan, D., Laird, T., Abraham, R.J., Barton, M., O’Dea, M.ORCID: 0000-0002-2757-7585, Abraham, S. and Cann, I. (2020) Implications of foraging and Interspecies interactions of birds for carriage of Escherichia coli strains resistant to critically important Antimicrobials. Applied and Environmental Microbiology, 86 (20). Art. e01610-20.

Sahibzada, S.ORCID: 0000-0001-7362-8323, Pang, S., Hernández‐Jover, M., Jordan, D., Abraham, S., O'Dea, M.ORCID: 0000-0002-2757-7585 and Heller, J. (2020) Prevalence and antimicrobial resistance of MRSA across different pig age groups in an intensive pig production system in Australia. Zoonoses and Public Health, 67 (5). pp. 576-586.

Lee, T., Pang, S., Stegger, M., Sahibzada, S.ORCID: 0000-0001-7362-8323, Abraham, S., Daley, D. and Coombs, G.ORCID: 0000-0003-1635-6506 (2020) A three-year whole genome sequencing perspective of Enterococcus faecium sepsis in Australia. PLoS ONE, 15 (2). e0228781.

Abraham, R.J., Abraham, S., Stevens, A.J., Page, S.W., McCluskey, A., Trott, D.J. and O'Handley, R.M. (2019) Aminoguanidines: New leads for treatment of Giardia duodenalis infection. International Journal for Parasitology: Drugs and Drug Resistance, 10 . pp. 38-44.

Hampson, D.J.ORCID: 0000-0002-7729-0427, Lugsomya, K., La, T., Phillips, N.D., Trott, D.J. and Abraham, S. (2019) Antimicrobial resistance in Brachyspira – An increasing problem for disease control. Veterinary Microbiology, 229 . pp. 59-71.

Bediako, N., Kunadu, A., Abraham, S. and Habib, I. (2019) Campylobacter at the Human–Food Interface: The African Perspective. Pathogens, 8 (2).

Harb, A., O’Dea, M.ORCID: 0000-0002-2757-7585, Abraham, S. and Habib, I. (2019) Childhood Diarrhoea in the Eastern Mediterranean Region with Special Emphasis on Non-Typhoidal Salmonella at the Human–Food Interface. Pathogens, 8 (2).

Sterndale, S.O., Evans, D.J., Mansfield, J.P., Clarke, J., Sahibzada, S.ORCID: 0000-0001-7362-8323, Abraham, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Miller, D.W.ORCID: 0000-0002-4634-5819, Kim, J.C. and Pluske, J.R.ORCID: 0000-0002-7194-2164 (2019) Correction to: Effect of mucin 4 allele on susceptibility to experimental infection with enterotoxigenic F4 Escherichia coli in pigs fed experimental diets. Journal of Animal Science and Biotechnology, 10 . Article number: 71.

Tenzin, S., Ogunniyi, A.D., Khazandi, M., Ferro, S., Bartsch, J., Crabb, S., Abraham, S., Deo, P. and Trott, D.J. (2019) Decontamination of aerosolised bacteria from a pig farm environment using a pH neutral electrochemically activated solution (Ecas4 anolyte). PLoS ONE, 14 (9).

Badger, S., Abraham, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Saputra, S., Abraham, R.J., Worthing, K.A., Norris, J.M., Trott, D.J., Jordan, D. and Caraguel, C.G.B. (2019) Diagnostic accuracy of phenotypic assays for determining antimicrobial resistance status in Staphylococcus pseudintermedius isolates from canine clinical cases. Veterinary Microbiology, 234 . pp. 101-109.

Sterndale, S.O., Evans, D.J., Mansfield, J.P., Clarke, J., Sahibzada, S.ORCID: 0000-0001-7362-8323, Abraham, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Miller, D.W.ORCID: 0000-0002-4634-5819, Kim, J.C. and Pluske, J.R.ORCID: 0000-0002-7194-2164 (2019) Effect of mucin 4 allele on susceptibility to experimental infection with enterotoxigenic F4 Escherichia coli in pigs fed experimental diets. Journal of Animal Science and Biotechnology, 10 . Article number: 56.

Abraham, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Sahibzada, S.ORCID: 0000-0001-7362-8323, Hewson, K., Pavic, A., Veltman, T., Abraham, R., Harris, T., Trott, D.J. and Jordan, D. (2019) Escherichia coli and Salmonella spp. isolated from Australian meat chickens remain susceptible to critically important antimicrobial agents. PLoS ONE, 14 (10). e0224281.

O’Dea, M.ORCID: 0000-0002-2757-7585, Sahibzada, S.ORCID: 0000-0001-7362-8323, Jordan, D., Laird, T., Lee, T., Hewson, K., Pang, S., Abraham, R., Coombs, G.W.ORCID: 0000-0003-1635-6506, Harris, T., Pavic, A. and Abraham, S. (2019) Genomic, antimicrobial resistance, and public health Insights into Enterococcus spp. from Australian chickens. Journal of Clinical Microbiology, 57 (8). e00319.

Badger, S., Abraham, S., Stryhn, H., Trott, D.J., Jordan, D. and Caraguel, C.G.B. (2019) Intra- and inter-laboratory agreement of the disc diffusion assay for assessing antimicrobial susceptibility of porcine Escherichia coli. Preventive Veterinary Medicine, 172 .

Harb, A., Abraham, S., Rusdi, B., Laird, T., O’Dea, M.ORCID: 0000-0002-2757-7585 and Habib, I. (2019) Molecular Detection and Epidemiological Features of Selected Bacterial, Viral, and Parasitic Enteropathogens in Stool Specimens from Children with Acute Diarrhea in Thi-Qar Governorate, Iraq. International Journal of Environmental Research and Public Health, 16 (9).

Lee, T., Pang, S., Abraham, S. and Coombs, G.W.ORCID: 0000-0003-1635-6506 (2019) Molecular characterization and evolution of the first outbreak of vancomycin resistant Enterococcus faecium in Western Australia. International Journal of Antimicrobial Agents, 53 (6). pp. 814-819.

Sodagari, H.R., Mohammed, A.B., Wang, P., O'Dea, M.ORCID: 0000-0002-2757-7585, Abraham, S., Robertson, I.ORCID: 0000-0002-4255-4752 and Habib, I. (2019) Non-typhoidal Salmonella contamination in egg shells and contents from retail in Western Australia: Serovar diversity, multilocus sequence types, and phenotypic and genomic characterizations of antimicrobial resistance. International Journal of Food Microbiology, 308 . Article 108305.

Canibe, N., O’Dea, M.ORCID: 0000-0002-2757-7585 and Abraham, S. (2019) Potential relevance of pig gut content transplantation for production and research. Journal of Animal Science and Biotechnology, 10 (1).

Mukerji, S., Stegger, M., Truswell, A.V., Laird, T., Jordan, D., Abraham, R.J., Harb, A., Barton, M., O’Dea, M.ORCID: 0000-0002-2757-7585 and Abraham, S. (2019) Resistance to critically important antimicrobials in Australian silver gulls (Chroicocephalus novaehollandiae) and evidence of anthropogenic origins. Journal of Antimicrobial Chemotherapy, 74 (9). pp. 2566-2574.

Coombs, G.W.ORCID: 0000-0003-1635-6506, Pang, S., Daley, D.A., Lee, Y.T., Abraham, S. and Leroi, M. (2019) Severe disease caused by community-associated MRSA ST398 Type V, Australia, 2017. Emerging Infectious Diseases, 25 (1). pp. 190-192.

Strunk, T., Gummer, J.P.A., Abraham, R., Abraham, S., Hibbert, J., Patole, S. and Currie, A. (2019) Topical coconut oil contributes to systemic monolaurin levels in very preterm infants. Neonatology, 116 (3). pp. 299-301.

Kidsley, A.K., Abraham, S., Bell, J.M., O'Dea, M.ORCID: 0000-0002-2757-7585, Laird, T.J., Jordan, D., Mitchell, P., McDevitt, C.A. and Trott, D.J. (2018) Antimicrobial Susceptibility of Escherichia coli and Salmonella spp. Isolates From Healthy Pigs in Australia: Results of a Pilot National Survey. Frontiers in Microbiology, 9 . Article 1207.

Lee, T., Pang, S., Abraham, S. and Coombs, G.W.ORCID: 0000-0003-1635-6506 (2018) Antimicrobial resistant CC17 Enterococcus faecium: The past, the present and the future. Journal of Global Antimicrobial Resistance, 16 . pp. 36-47.

Rusdi, B., Laird, T., Abraham, R., Ash, A.ORCID: 0000-0001-8218-7048, Robertson, I.D.ORCID: 0000-0002-4255-4752, Mukerji, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, Abraham, S. and O’Dea, M.A.ORCID: 0000-0002-2757-7585 (2018) Carriage of critically important antimicrobial resistant bacteria and zoonotic parasites amongst camp dogs in remote Western Australian indigenous communities. Scientific Reports, 8 . Article Number: 8725.

Worthing, K., Pang, S., Trott, D.J., Abraham, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, Jordan, D., McIntyre, L., Davies, M.R. and Norris, J. (2018) Characterisation of Staphylococcus felis isolated from cats using whole genome sequencing. Veterinary Microbiology, 222 . pp. 98-104.

Worthing, K.A., Schwendener, S., Perreten, V., Saputra, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, Pang, S., Davies, M.R., Abraham, S., Trott, D.J., Norris, J.M. and Fey, P.D. (2018) Characterization of staphylococcal cassette chromosome mec elements from methicillin-resistant Staphylococcus pseudintermedius infections in Australian animals. mSphere, 3 (6). e00491-18.

Worthing, K.A., Abraham, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, Pang, S., Saputra, S., Jordan, D., Trott, D.J. and Norris, J.M. (2018) Clonal diversity and geographic distribution of methicillin-resistant Staphylococcus pseudintermedius from Australian animals: Discovery of novel sequence types. Veterinary Microbiology, 213 . pp. 58-65.

Murphy, R.J.T., Lee, Y.T., Pang, S., Bastholm, T.R., Crowe, J.E., Davis, A.M., Coombs, G.W.ORCID: 0000-0003-1635-6506, O’Dea, M.A.ORCID: 0000-0002-2757-7585, Abraham, S., Ramsay, J.P. and Stajich, J. (2018) Complete genome sequence of a Staphylococcus aureus sequence type 612 isolate from an Australian horse. Microbiology Resource Announcements, 7 (4). e00869-18.

Jacobson, C.ORCID: 0000-0001-9427-1941, Al-Habsi, K., Ryan, U.ORCID: 0000-0003-2710-9324, Williams, A., Anderson, F., Yang, R.ORCID: 0000-0003-2563-2015, Abraham, S. and Miller, D.ORCID: 0000-0002-4634-5819 (2018) Cryptosporidium infection is associated with reduced growth and diarrhoea in goats beyond weaning. Veterinary Parasitology, 260 . pp. 30-37.

Abraham, S., Kirkwood, R.N., Laird, T., Saputra, S., Mitchell, T., Singh, M., Linn, B., Abraham, R.J., Pang, S., Gordon, D.M., Trott, D.J. and O’Dea, M.ORCID: 0000-0002-2757-7585 (2018) Dissemination and persistence of extended-spectrum cephalosporin-resistance encoding IncI1-blaCTXM-1 plasmid among Escherichia coli in pigs. The ISME Journal, 12 . pp. 2352-2362.

O’Dea, M.A.ORCID: 0000-0002-2757-7585, Laird, T., Abraham, R., Jordan, D., Lugsomya, K., Fitt, L., Gottschalk, M., Truswell, A. and Abraham, S. (2018) Examination of Australian Streptococcus suis isolates from clinically affected pigs in a global context and the genomic characterisation of ST1 as a predictor of virulence. Veterinary Microbiology, 226 . pp. 31-40.

Khazandi, M., Al-Farha, A.A-B, Coombs, G.W.ORCID: 0000-0003-1635-6506, O’Dea, M.ORCID: 0000-0002-2757-7585, Pang, S., Trott, D.J., Aviles, R.R., Hemmatzadeh, F., Venter, H., Ogunniyi, A.D., Hoare, A., Abraham, S. and Petrovski, K.R. (2018) Genomic characterization of coagulase-negative staphylococci including methicillin-resistant Staphylococcus sciuri causing bovine mastitis. Veterinary Microbiology, 219 . pp. 17-22.

Abraham, R.J., O'Dea, M.ORCID: 0000-0002-2757-7585, Rusdi, B., Page, S.W., O'Handley, R. and Abraham, S. (2018) Giardia duodenalis mouse model for the development of novel antigiardial agents. Journal of Microbiological Methods, 145 . pp. 7-9.

Al-Habsi, K., Yang, R.ORCID: 0000-0003-2563-2015, Abraham, S., Ryan, U.ORCID: 0000-0003-2710-9324, Miller, D.ORCID: 0000-0002-4634-5819 and Jacobson, C.ORCID: 0000-0001-9427-1941 (2018) Molecular characterisation of Salmonella enterica serovar Typhimurium and Campylobacter jejuni faecal carriage by captured rangeland goats. Small Ruminant Research, 158 . pp. 48-53.

Worthing, K.A., Abraham, S., Pang, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, Saputra, S., Jordan, D., Wong, H.S., Abraham, R.J., Trott, D.J. and Norris, J.M. (2018) Molecular characterization of methicillin-resistant Staphylococcus aureus isolated from Australian animals and veterinarians. Microbial Drug Resistance, 24 (2). pp. 203-212.

Worthing, K.A., Brown, J., Gerber, L., Trott, D.J., Abraham, S. and Norris, J.M. (2018) Molecular epidemiology of methicillin-resistant staphylococci amongst veterinary personnel, personnel-owned pets, patients and the hospital environment of two companion animal veterinary hospitals. Veterinary Microbiology, 223 . pp. 79-85.

Harb, A., Habib, I., Mezal, E.H., Kareem, H.S., Laird, T., O'Dea, M.ORCID: 0000-0002-2757-7585 and Abraham, S. (2018) Occurrence, antimicrobial resistance and whole-genome sequencing analysis of Salmonella isolates from chicken carcasses imported into Iraq from four different countries. International Journal of Food Microbiology, 284 . pp. 84-90.

Skinner-Adams, T.S., Hart, C.J., Riches, A., Ryan, J., Abraham, S. and Abraham, R. (2018) Potent and selective Anti-gardia compound seies: Progress and new developments. The American Journal of Tropical Medicine and Hygiene, 99 (Iss.4 Supp. 1). pp. 655-656.

Worthing, K.A., Marcus, A., Abraham, S., Trott, D.J. and Norris, J.M. (2018) Qac genes and biocide tolerance in clinical veterinary methicillin-resistant and methicillin-susceptible Staphylococcus aureus and Staphylococcus pseudintermedius. Veterinary Microbiology, 216 . pp. 153-158.

Badger, S., Abraham, S., Saputra, S., Trott, D.J., Turnidge, J., Mitchell, T., Caraguel, C.G.B. and Jordan, D. (2018) Relative performance of antimicrobial susceptibility assays on clinical Escherichia coli isolates from animals. Veterinary Microbiology, 214 . pp. 56-64.

Al-Habsi, K., Jordan, D., Harb, A., Laird, T., Yang, R.ORCID: 0000-0003-2563-2015, O’Dea, M.ORCID: 0000-0002-2757-7585, Jacobson, C.ORCID: 0000-0001-9427-1941, Miller, D.W.ORCID: 0000-0002-4634-5819, Ryan, U.ORCID: 0000-0003-2710-9324 and Abraham, S. (2018) Salmonella enterica isolates from Western Australian rangeland goats remain susceptible to critically important antimicrobials. Scientific Reports, 8 (1). Article number: 15326.

Yang, R.ORCID: 0000-0003-2563-2015, Abraham, S., Gardner, G.E.ORCID: 0000-0001-7499-9986, Ryan, U.ORCID: 0000-0003-2710-9324 and Jacobson, C.ORCID: 0000-0001-9427-1941 (2017) Prevalence and pathogen load of Campylobacter spp., Salmonella enterica and Escherichia coli O157/O145 serogroup in sheep faeces collected at sale yards and in abattoir effluent in Western Australia. Australian Veterinary Journal, 95 (5). pp. 143-148.

Saputra, S., Jordan, D., Mitchell, T., Wong, H.S., Abraham, R.J., Kidsley, A., Turnidge, J., Trott, D.J. and Abraham, S. (2017) Antimicrobial resistance in clinical Escherichia coli isolated from companion animals in Australia. Veterinary Microbiology, 211 . pp. 43-50.

Saputra, S., Jordan, D., Worthing, K.A., Norris, J.M., Wong, H.S., Abraham, R., Trott, D.J. and Abraham, S. (2017) Antimicrobial resistance in coagulase-positive staphylococci isolated from companion animals in Australia: A one year study. PLOS ONE, 12 (4). e0176379.

Wang, Y., Barton, M., Elliott, L., Li, X., Abraham, S., O'Dea, M.ORCID: 0000-0002-2757-7585 and Munro, J. (2017) Bacteriophage therapy for the control of Vibrio harveyi in greenlip abalone (Haliotis laevigata). Aquaculture, 473 . pp. 251-258.

Abraham, S., O'Dea, M.ORCID: 0000-0002-2757-7585, Page, S.W. and Trott, D.J. (2017) Current and future antimicrobial resistance issues for the Australian pig industry. Animal Production Science, 57 (12). pp. 2398-2407.

Mukerji, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Barton, M., Kirkwood, R., Lee, T. and Abraham, S. (2017) Development and transmission of antimicrobial resistance among Gram-negative bacteria in animals and their public health impact. Essays In Biochemistry, 61 (1). pp. 23-35.

Harb, A., O'Dea, M.ORCID: 0000-0002-2757-7585, Hanan, Z.K., Abraham, S. and Habib, I. (2017) Prevalence, risk factors and antimicrobial resistance of Salmonella diarrhoeal infection among children in Thi-Qar Governorate, Iraq. Epidemiology and Infection, 145 (16). pp. 3486-3496.

Abraham, S., Jagoe, S., Pang, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, O'Dea, M.ORCID: 0000-0002-2757-7585, Kelly, J., Khazandi, M., Petrovski, K.R. and Trott, D.J. (2017) Reverse zoonotic transmission of community-associated MRSA ST1-IV to a dairy cow. International Journal of Antimicrobial Agents, 50 (1). pp. 125-126.

Sahibzada, S.ORCID: 0000-0001-7362-8323, Abraham, S., Coombs, G.W.ORCID: 0000-0003-1635-6506, Pang, S., Hernández-Jover, M., Jordan, D. and Heller, J. (2017) Transmission of highly virulent community-associated MRSA ST93 and livestock-associated MRSA ST398 between humans and pigs in Australia. Scientific Reports, 7 . Article number: 5273.

Brean, M., Abraham, S., Hebart, M. and Kirkwood, R.N. (2016) Influence of parity of birth and suckled sows on piglet nasal mucosal colonization with Haemophilus parasuis. The Canadian veterinary journal = La revue veterinaire canadienne, 57 (12). pp. 1281-1283.

Jahanbakhsh, S., Smith, M.G., Kohan-Ghadr, H-R, Letellier, A., Abraham, S., Trott, D.J. and Fairbrother, J.M. (2016) Dynamics of extended-spectrum cephalosporin resistance in pathogenic Escherichia coli isolated from diseased pigs in Quebec, Canada. International Journal of Antimicrobial Agents, 48 (2). pp. 194-202.

Abraham, S., O’Dea, M.ORCID: 0000-0002-2757-7585, Trott, D.J., Abraham, R.J., Hughes, D., Pang, S., McKew, G., Cheong, E.Y.L., Merlino, J., Saputra, S., Malik, R. and Gottlieb, T. (2016) Isolation and plasmid characterization of carbapenemase (IMP-4) producing Salmonella enterica Typhimurium from cats. Scientific Reports, 6 . Article 35527.

Worthing, K.A., Coombs, G.W.ORCID: 0000-0003-1635-6506, Pang, S., Abraham, S., Saputra, S., Trott, D.J., Jordan, D., Wong, H.S., Abraham, R.J. and Norris, J.M. (2016) Isolation of mecC MRSA in Australia. Journal of Antimicrobial Chemotherapy, 71 (8). pp. 2348-2349.

Groves, M.D., Crouch, B., Coombs, G.W.ORCID: 0000-0003-1635-6506, Jordan, D., Pang, S., Barton, M.D., Giffard, P., Abraham, S. and Trott, D.J. (2016) Molecular epidemiology of methicillin-resistant Staphylococcus aureus isolated from Australian veterinarians. PLoS ONE, 11 (1). Article e0146034.

Smith, M.G., Jordan, D., Gibson, J.S., Cobbold, R.N., Chapman, T.A., Abraham, S. and Trott, D.J. (2016) Phenotypic and genotypic profiling of antimicrobial resistance in enteric Escherichia coli communities isolated from finisher pigs in Australia. Australian Veterinary Journal, 94 (10). pp. 371-376.

Vangchhia, B., Abraham, S., Bell, J.M., Collignon, P., Gibson, J.S., Ingram, P.R., Johnson, J.R., Kennedy, K., Trott, D.J., Turnidge, J.D. and Gordon, D.M. (2016) Phylogenetic diversity, antimicrobial susceptibility and virulence characteristics of phylogroup F Escherichia coli in Australia. Microbiology, 162 (11). pp. 1904-1912.

Abraham, R.J., Stevens, A.J., Young, K.A., Russell, C., Qvist, A., Khazandi, M., Wong, H.S., Abraham, S., Ogunniyi, A.D., Page, S.W., O’Handley, R., McCluskey, A. and Trott, D.J. (2016) Robenidine analogues as gram-positive antibacterial agents. Journal of Medicinal Chemistry, 59 (5). pp. 2126-2138.

Pande, V.V., Gole, V.C., McWhorter, A.R., Abraham, S. and Chousalkar, K.K. (2015) Antimicrobial resistance of non-typhoidal Salmonella isolates from egg layer flocks and egg shells. International Journal of Food Microbiology, 203 . pp. 23-26.

Wyrsch, E., Chowdhury, P.R., Abraham, S., Santos, J., Darling, A.E, Charles, I.G, Chapman, T.A and Djordjevic, S.P (2015) Comparative genomic analysis of a multiple antimicrobial resistant enterotoxigenic E. coli O157 lineage from Australian pigs. BMC Genomics, 16 (1).

Abraham, S., Jordan, D., Wong, H.S., Johnson, J.R., Toleman, M.A., Wakeham, D.L., Gordon, D.M., Turnidge, J.D., Mollinger, J.L., Gibson, J.S. and Trott, D.J. (2015) First detection of extended-spectrum cephalosporin- and fluoroquinolone-resistant Escherichia coli in Australian food-producing animals. Journal of Global Antimicrobial Resistance, 3 (4). pp. 273-277.

Blyton, M.D.J., Pi, H., Vangchhia, B., Abraham, S., Trott, D.J., Johnson, J.R., Gordon, D.M. and Griffiths, M.W. (2015) Genetic structure and antimicrobial resistance of Escherichia coli and cryptic clades in birds with diverse human associations. Applied and Environmental Microbiology, 81 (15). pp. 5123-5133.

Guo, S., Wakeham, D., Brouwers, H.J.M., Cobbold, R.N., Abraham, S., Mollinger, J.L., Johnson, J.R., Chapman, T.A., Gordon, D.M., Barrs, V.R. and Trott, D.J. (2015) Human-associated fluoroquinolone-resistant Escherichia coli clonal lineages, including ST354, isolated from canine feces and extraintestinal infections in Australia. Microbes and Infection, 17 (4). pp. 266-274.

Abraham, S., Wong, H.S., Turnidge, J., Johnson, J.R. and Trott, D.J. (2014) Carbapenemase-producing bacteria in companion animals: A public health concern on the horizon. Journal of Antimicrobial Chemotherapy, 69 (5). pp. 1155-1157.

Siak, M., Burrows, A.K.ORCID: 0000-0001-9293-1352, Coombs, G.W.ORCID: 0000-0003-1635-6506, Khazandi, M., Abraham, S., Norris, J.M., Weese, J.S. and Trott, D.J. (2014) Characterization of meticillin-resistant and meticillin-susceptible isolates of Staphylococcus pseudintermedius from cases of canine pyoderma in Australia. Journal of Medical Microbiology, 63 (9). pp. 1228-1233.

Abraham, S., Trott, D.J., Jordan, D., Gordon, D.M., Groves, M.D., Fairbrother, J.M., Smith, M.G., Zhang, R. and Chapman, T.A. (2014) Phylogenetic and molecular insights into the evolution of multidrug-resistant porcine enterotoxigenic Escherichia coli in Australia. International Journal of Antimicrobial Agents, 44 (2). pp. 105-111.

Abraham, S., Groves, M.D., Trott, D.J., Chapman, T.A., Turner, B., Hornitzky, M. and Jordan, D. (2014) Salmonella enterica isolated from infections in Australian livestock remain susceptible to critical antimicrobials. International Journal of Antimicrobial Agents, 43 (2). pp. 126-130.

Groves, M.D., O'Sullivan, M.V.N., Brouwers, H J.M., Chapman, T.A., Abraham, S., Trott, D.J., Al Jassim, R., Coombs, G.W.ORCID: 0000-0003-1635-6506, Skov, R.L. and Jordan, D. (2014) Staphylococcus aureus ST398 detected in pigs in Australia. Journal of Antimicrobial Chemotherapy, 69 (5). pp. 1426-1428.

Feary, D.J., Abraham, S., Woolford, L. and Trott, D.J. (2013) Identification of Actinomyces denticolensas a cause of a soft tissue abscess in a horse. Australian Veterinary Journal, 91 (10). pp. 416-417.

Trott, D., Jordan, D., Barton, M., Abraham, S. and Groves, M. (2013) Vets versus pets: methicillin-resistant Staphylococcus aureus in Australian animals and their doctors. Microbiology Australia, 34 (1). pp. 25-27.

Abraham, S., Chapman, T.A., Zhang, R., Chin, J., Mabbett, A.N., Totsika, M. and Schembri, M.A. (2012) Molecular characterization of Escherichia coli strains that cause symptomatic and asymptomatic urinary tract infections. Journal of Clinical Microbiology, 50 (3). pp. 1027-1030.

Abraham, S., Gordon, D.M., Chin, J., Brouwers, H.J.M., Njuguna, P., Groves, M.D., Zhang, R. and Chapman, T.A. (2012) Molecular characterization of commensal Escherichia coli adapted to different compartments of the porcine gastrointestinal tract. Applied and Environmental Microbiology, 78 (19). pp. 6799-6803.

Abraham, S., Chin, J., Brouwers, H.J.M., Zhang, R. and Chapman, T.A. (2012) Molecular serogrouping of porcine enterotoxigenic Escherichia coli from Australia. Journal of Microbiological Methods, 88 (1). pp. 73-76.

Abraham, S., Chin, J., Brouwers, H.J.M., Turner, B., Zhang, R. and Chapman, T.A. (2011) Green fluorescent protein-based biosensor to detect and quantify stress responses induced by DNA-degrading colicins. Applied and Environmental Microbiology, 77 (18). pp. 6691-6693.

Conference Paper

Abraham, R.J., Abraham, S., Zahedi, A.ORCID: 0000-0002-0165-3797 and Ryan, U.ORCID: 0000-0003-2710-9324 (2016) Cross-species transmission of Giardia duodenalis. In: International Congress of Tropical Medicine and Malaria, 18 - 22 September 2016, Brisbane, QLD, Australia

Book Chapter

Chin, J., Abraham, S., Zhang, R. and Al-Jassim, R. (2010) Diarrheagenic escherichia coli pathotypes (DEP) including enterohaemorrhagic (EHEC)/Shiga-toxin E. coli (STEC). In: Schuller, M., Sloots, T.P., James, G.S., Halliday, C.L. and Carter, I.W.J., (eds.) PCR for Clinical Microbiology: An Australian and International Perspective. Springer, Dordrecht, pp. 149-155.