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Publications: Australian Centre for Necrotrophic Fungal Pathogens

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Number of items at this level: 72.

Journal Article

Anderson, J.P., Lichtenzveig, J., Gleason, C., Oliver, R.P. and Singh, K.B. (2010) The B-3 ethylene response factor MtERF1-1 mediates resistance to a subset of root pathogens in Medicago truncatula without adversely affecting symbiosis with Rhizobia. Plant Physiology, 154 (2). pp. 861-873.

Appels, R., Liu, Z., Friesen, T.L., Ling, H., Meinhardt, S.W., Oliver, R.P., Rasmussen, J.B. and Faris, J.D. (2006) TheTsn1–ToxA interaction in the wheat–Stagonospora nodorum pathosystem parallels that of the wheat–tan spot system. Genome, 49 (10). pp. 1265-1273.

Bindslev, L., Kershaw, M.J., Talbot, N.J. and Oliver, R.P. (2001) Complementation of the Magnaporthe grisea ΔcpkA mutation by the Blumeria graminis PKA-c gene: Functional genetic analysis of an obligate plant pathogen. Molecular Plant-Microbe Interactions, 14 (12). pp. 1368-1375.

Bindslev, L., Oliver, R.P. and Johansen, B. (2002) In situ PCR for detection and identification of fungal species. Mycological Research, 106 (3). pp. 277-279.

Bringans, S., Hane, J.K., Casey, T., Tan, K-C, Lipscombe, R., Solomon, P.S. and Oliver, R.P. (2009) Deep proteogenomics; high throughput gene validation by multidimensional liquid chromatography and mass spectrometry of proteins from the fungal wheat pathogen Stagonospora nodorum. BMC Bioinformatics, 10 (1). p. 301.

Bussink, H-J, Clarke, A. and Oliver, R. (2001) The Cladosporium fulvum Bap1 gene: Evidence for a novel class of Yap-related transcription factors with ankyrin repeats in phytopathogenic fungi. European Journal of Plant Pathology, 107 (6). pp. 655-659.

Bussink, H-J and Oliver, R. (2001) Identification of two highly divergent catalase genes in the fungal tomato pathogen,Cladosporium fulvum. European Journal of Biochemistry, 268 (1). pp. 15-24.

Casey, T., Solomon, P.S., Bringans, S., Tan, K.C., Oliver, R.P. and Lipscombe, R. (2010) Quantitative proteomic analysis of G-protein signalling in Stagonospora nodorumusing isobaric tags for relative and absolute quantification. Proteomics, 10 (1). pp. 38-47.

Clark, A.J., Blissett, K.J. and Oliver, R.P. (2003) Investigating the role of polyols in Cladosporium fulvum during growth under hyper-osmotic stress and in planta. Planta, 216 (4). pp. 614-619.

Ding, J.L., Tan, K.C., Thangamani, S., Kusuma, N., Seow, W.K., Bui, T.H.H., Wang, J. and Ho, B. (2005) Spatial and temporal coordination of expression of immune response genes during Pseudomonas infection of horseshoe crab, Carcinoscorpius rotundicauda. Genes and Immunity, 6 (7). pp. 557-574.

Ellwood, S.R., Kamphuis, L.G. and Oliver, R.P. (2006) Identification of Sources of Resistance toPhoma medicaginisIsolates inMedicago truncatulaSARDI Core Collection Accessions, and Multigene Differentiation of Isolates. Phytopathology, 96 (12). pp. 1330-1336.

Ellwood, S.R., Phan, H.T.T., Jordan, M., Hane, J.K., Torres, A.M., Avila, C.M., Cruz-Izquierdo, S. and Oliver, R.P. (2008) Construction of a comparative genetic map in faba bean (Vicia faba L.); conservation of genome structure with Lens culinaris. BMC Genomics, 9 (1). p. 380.

Friesen, T.L., Faris, J.D., Solomon, P.S. and Oliver, R.P. (2008) Host-specific toxins: Effectors of necrotrophic pathogenicity. Cellular Microbiology, 10 (7). pp. 1421-1428.

Goodwin, P.H., Oliver, R.P. and Hsiang, T. (2004) Comparative analysis of expressed sequence tags from Malva pusilla, Sorghum bicolor, and Medicago truncatula infected with Colletotrichum species. Plant Science, 167 (3). pp. 481-489.

Greenberg, J.R., Price, N.P., Oliver, R.P., Sherman, F. and Rustchenko, E. (2005) Candida albicans SOU1 encodes a sorbose reductase required forL-sorbose utilization. Yeast, 22 (12). pp. 957-969.

Gummer, J., Banazis, M., Maker, G.ORCID: 0000-0003-1666-9377, Solomon, P., Oliver, R. and Trengove, R. (2009) Use of mass spectrometry for metabolite profiling and metabolomics. Australian Biochemist, 40 (3). pp. 5-8.

Guo, J., Jiang, R.H.Y., Kamphuis, L.G. and Govers, F. (2006) A cDNA-AFLP based strategy to identify transcripts associated with avirulence in Phytophthora infestans. Fungal Genetics and Biology, 43 (2). pp. 111-123.

Hane, J.K., Lowe, R.G.T., Solomon, P.S., Tan, K.C., Schoch, C.L., Spatafora, J.W., Crous, P.W., Kodira, C., Birren, B.W., Galagan, J.E., Torriani, S.F.F., McDonald, B.A. and Oliver, R.P. (2007) Dothideomycete Plant Interactions Illuminated by Genome Sequencing and EST Analysis of the Wheat Pathogen Stagonospora nodorum. The Plant Cell, 19 (11). pp. 3347-3368.

Hane, J.K. and Oliver, R.P. (2008) RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences. BMC Bioinformatics, 9 (1). p. 478.

Kamphuis, L.G., Williams, A.H., D'Souza, N.K., Pfaff, T., Ellwood, S.R., Groves, E., Singh, K.B., Oliver, R.P. and Lichtenzveig, J. (2007) The Medicago truncatula reference accession A17 has an aberrant chromosomal configuration. New Phytologist, 174 (2). pp. 299-303.

Kinane, J. and Oliver, R.P. (2003) Evidence that the appressorial development in barley powdery mildew is controlled by MAP kinase activity in conjunction with the cAMP pathway. Fungal Genetics and Biology, 39 (1). pp. 94-102.

Li, W., Csukai, M., Corran, A., Crowley, P., Solomon, P.S. and Oliver, R.P. (2008) Malayamycin, a new streptomycete antifungal compound, specifically inhibits sporulation of Stagonospora nodorum (Berk) Castell and Germano, the cause of wheat glume blotch disease. Pest Management Science, 64 (12). pp. 1294-1302.

Lichtenzveig, J., Bonfil, D.J., Zhang, H., Shtienberg, D. and Abbo, S. (2006) Mapping quantitative trait loci in chickpea associated with time to flowering and resistance to Didymella rabiei the causal agent of Ascochyta blight. Theoretical and Applied Genetics, 113 (7). pp. 1357-1369.

Lichtenzveig, J., Scheuring, C., Dodge, J., Abbo, S. and Zhang, H-B (2005) Construction of BAC and BIBAC libraries and their applications for generation of SSR markers for genome analysis of chickpea, Cicer arietinum L. Theoretical and Applied Genetics, 110 (3). pp. 492-510.

Liu, Z., Ellwood, S.R., Oliver, R.P. and Friesen, T.L. (2010) Pyrenophora teres: profile of an increasingly damaging barley pathogen. Molecular Plant Pathology, 12 (1). pp. 1-19.

Liu, Z., Faris, J.D., Oliver, R.P., Tan, K.C., Solomon, P.S., McDonald, M.C., McDonald, B.A., Nunez, A., Lu, S., Rasmussen, J.B. and Friesen, T.L. (2009) SnTox3 acts in effector triggered susceptibility to induce disease on wheat carrying the Snn3 gene. PLoS Pathogens, 5 (9). e1000581.

Lowe, R.G.T., Lord, M., Rybak, K., Trengove, R.D., Oliver, R.P. and Solomon, P.S. (2009) Trehalose biosynthesis is involved in sporulation of Stagonospora nodorum. Fungal Genetics and Biology, 46 (5). pp. 381-389.

Mackie, J.M., Musial, J.M., Armour, D.J., Phan, H.T.T., Ellwood, S., Aitken, K.S. and Irwin, J.A.G. (2007) Identification of QTL for reaction to three races of Colletotrichum trifolii and further analysis of inheritance of resistance in autotetraploid lucerne. Theoretical and Applied Genetics, 114 (8). pp. 1417-1426.

Nair, R.M., Hughes, S.J., Peck, D.M., Crocker, G., Ellwood, S., Hill, J.R., Hunt, C.H. and Auricht, G.C. (2006) Progress in development of spotted medics (Medicago arabica L. Huds.) for Mediterranean farming systems. Australian Journal of Agricultural Research, 57 (4). pp. 447-455.

Nelson, M.N., Phan, H.T.T., Ellwood, S.R., Moolhuijzen, P.M., Hane, J.K., Williams, A., O'Lone, C.E., Fosu-Nyarko, J., Scobie, M., Cakir, M., Jones, M.G.K.ORCID: 0000-0001-5002-0227, Bellgard, M., Książkiewicz, M., Wolko, B., Barker, S., Oliver, R.P. and Cowling, W.A. (2006) The first gene-based map of Lupinus angustifolius L.-location of domestication genes and conserved synteny with Medicago truncatula. Theoretical and Applied Genetics, 113 (2). pp. 225-238.

Nourollahi, K., Javannikkhah, M., Naghavi, M.R., Lichtenzveig, J., Okhovat, S.M., Oliver, R.P. and Ellwood, S.R. (2011) Genetic diversity and population structure of Ascochyta rabiei from the western Iranian Ilam and Kermanshah provinces using MAT and SSR markers. Mycological Progress, 10 (1). pp. 1-7.

Oliver, R. (2009) Plant breeding for disease resistance in the age of effectors. Phytoparasitica, 37 (1). pp. 1-5.

Oliver, R.P. and Ipcho, S.V. S. (2004) Arabidopsis pathology breathes new life into the necrotrophs-vs.-biotrophs classification of fungal pathogens. Molecular Plant Pathology, 5 (4). pp. 347-352.

Oliver, R.P., Lord, M., Rybak, K., Faris, J.D. and Solomon, P.S. (2008) Emergence of tan spot disease caused by toxigenic Pyrenophora tritici-repentis in Australia is not associated with increased deployment of toxin-sensitive cultivars. Phytopathology, 98 (5). pp. 488-491.

Oliver, R.P., Rybak, K., Shankar, M., Loughman, R., Harry, N. and Solomon, P.S. (2008) Quantitative disease resistance assessment by real-time PCR using the Stagonospora nodorum-wheat pathosystem as a model. Plant Pathology, 57 (3). pp. 527-532.

Oliver, R.P., Rybak, K., Solomon, P.S. and Ferguson-Hunt, M. (2009) Prevalence of ToxA-sensitive alleles of the wheat gene Tsn1 in Australian and Chinese wheat cultivars. Crop and Pasture Science, 60 (4). pp. 348-352.

Oliver, R.P. and Solomon, P.S. (2004) Does the oxidative stress used by plants for defence provide a source of nutrients for pathogenic fungi? Trends in Plant Science, 9 (10). pp. 472-473.

Oliver, R.P. and Solomon, P.S. (2010) New developments in pathogenicity and virulence of necrotrophs. Current Opinion in Plant Biology, 13 (4). pp. 415-419.

Oliver, R.P. and Solomon, P.S. (2008) Recent fungal diseases of crop plants: Is lateral gene transfer a common theme? Molecular Plant-Microbe Interactions, 21 (3). pp. 287-293.

Phan, H.T.T., Ellwood, S.R., Adhikari, K., Nelson, M.N. and Oliver, R.P. (2007) The first genetic and comparative map of white lupin (Lupinus albus L.): Identification of QTLs for anthracnose resistance and flowering time, and a locus for alkaloid content. DNA Research, 14 (2). pp. 59-70.

Phan, H.T.T., Ellwood, S.R., Ford, R., Thomas, S. and Oliver, R. (2006) Differences in syntenic complexity between Medicago truncatula with Lens culinaris and Lupinus albus. Functional Plant Biology, 33 (8). p. 775.

Phan, H.T.T., Ellwood, S.R., Hane, J.K., Ford, R., Materne, M. and Oliver, R.P. (2007) Extensive macrosynteny between Medicago truncatula and Lens culinaris ssp. culinaris. Theoretical and Applied Genetics, 114 (3). pp. 549-558.

Solomon, P.S., Ipcho, S.V.S., Hane, J.K., Tan, K.C. and Oliver, R.P. (2008) A quantitative PCR approach to determine gene copy number. Fungal Genetics Reports, 55 . pp. 5-8.

Solomon, P.S., J, C.I. and Oliver, R.P. (2006) &-Aminolaevulinic acid synthesis is required for virulence of the wheat pathogen Stagonospora nodorum. Microbiology, 152 (5). pp. 1533-1538.

Solomon, P.S., Lee, R.C., Wilson, T.J.G. and Oliver, R.P. (2004) Pathogenicity of Stagonospora nodorum requires malate synthase. Molecular Microbiology, 53 (4). pp. 1065-1073.

Solomon, P.S., Lowe, R.G.T., Tan, K-C, Waters, O.D.C. and Oliver, R.P. (2006) Stagonospora nodorum: Cause of stagonospora nodorum blotch of wheat. Molecular Plant Pathology, 7 (3). pp. 147-156.

Solomon, P.S., Lowe, R.G.T., Trengove, R.D., Rechberger, J. and Oliver, R.P. (2006) Normalization of metabolites in heterogenous systems using genomics. Analytical Biochemistry, 350 (1). pp. 156-158.

Solomon, P.S., Nielsen, P.S., Clark, A.J. and Oliver, R.P. (2000) Methionine synthase, a gene required for methionine synthesis, is expressed in planta by Cladosporium fulvum. Molecular Plant Pathology, 1 (5). pp. 315-323.

Solomon, P.S. and Oliver, R.P. (2002) Evidence that γ-aminobutyric acid is a major nitrogen source during Cladosporium fulvum infection of tomato. Planta, 214 (3). pp. 414-420.

Solomon, P.S. and Oliver, R.P. (2004) Functional characterisation of glyoxalase I from the fungal wheat pathogen Stagonospora nodorum. Current Genetics, 46 (2).

Solomon, P.S. and Oliver, R.P. (2001) The nitrogen content of the tomato leaf apoplast increases during infection by Cladosporium fulvum. Planta, 213 (2). pp. 241-249.

Solomon, P.S., Tan, K-C and Oliver, R.P. (2003) The nutrient supply of pathogenic fungi; a fertile field for study. Molecular Plant Pathology, 4 (3). pp. 203-210.

Solomon, P.S., Tan, K.C. and Oliver, R.P. (2005) Mannitol 1-phosphate metabolism is required for sporulation in planta of the wheat pathogen Stagonospora nodorum. Molecular Plant-Microbe Interactions, 18 (2). pp. 110-115.

Solomon, P.S., Thomas, S.W., Spanu, P. and Oliver, R.P. (2003) The utilisation of di/tripeptides by Stagonospora nodorum is dispensable for wheat infection. Physiological and Molecular Plant Pathology, 63 (4). pp. 191-199.

Solomon, P.S., Waters, O.D.C., Simmonds, J., Cooper, R.M. and Oliver, R.P. (2005) The Mak2 MAP kinase signal transduction pathway is required for pathogenicity in Stagonospora nodorum. Current Genetics, 48 (1). pp. 60-68.

Stukenbrock, E.H., Banke, S., Zala, M., McDonald, B.A. and Oliver, R.P. (2005) Isolation and characterization of EST-derived microsatellite loci from the fungal wheat pathogen Phaeosphaeria nodorum. Molecular Ecology Notes, 5 (4). pp. 931-933.

Tan, K.C., Heazlewood, J.L., Millar, A.H., Oliver, R.P. and Solomon, P.S. (2009) Proteomic identification of extracellular proteins regulated by the Gna1 Gα subunit in Stagonospora nodorum. Mycological Research, 113 (5). pp. 523-531.

Tan, K.C., Ipcho, S.V.S., Trengove, R.D., Oliver, R.P. and Solomon, P.S. (2009) Assessing the impact of transcriptomics, proteomics and metabolomics on fungal phytopathology. Molecular Plant Pathology, 10 (5). pp. 703-715.

Thomas, S.W., Glaring, M.A., Rasmussen, S.W., Kinane, J.T. and Oliver, R.P. (2002) Transcript profiling in the Barley Mildew pathogen Blumeria graminis by serial analysis of gene expression(SAGE). Molecular Plant-Microbe Interactions, 15 (8). pp. 847-856.

Thomas, S.W., Rasmussen, S.W., Glaring, M.A., Rouster, J.A., Christiansen, S.K. and Oliver, R.P. (2001) Gene identification in the obligate fungal pathogen Blumeria graminis by expressed sequence tag analysis. Fungal Genetics and Biology, 33 (3). pp. 195-211.

Waters, O.D.C., Solomon, P.S., Jörgens, C.I., Lowe, R.G.T., Rechberger, J., Trengove, R.D. and Oliver, R.P. (2006) Mannitol is required for asexual sporulation in the wheat pathogen Stagonospora nodorum (glume blotch). Biochemical Journal, 399 (2). pp. 231-239.

Wilson, T.J.G., Thomsen, K.K., Petersen, B.O., Duus, J.Ø. and Oliver, R.P. (2003) Detection of 3-hydroxykynurenine in a plant pathogenic fungus. Biochemical Journal, 371 (3). pp. 783-788.

Wirsel, S.G.R., Runge-Froböse, C., Ahrén, D.G., Kemen, E., Oliver, R.P. and Mendgen, K.W. (2002) Four or more species of Cladosporium sympatrically colonize Phragmites australis. Fungal Genetics and Biology, 35 (2). pp. 99-113.

Conference Paper

Nelson, M., Boersma, J., Chudy, M., Lesniewska, K., Ellwood, S., Phan, H., Moolhuijzen, P., Bellgard, M., Oliver, R., Swiecicki, W., Wolko, B. and Cowling, W. (2008) A dense reference map of the Lupinus Angustifolius L. Genome: A foundation for building lupin genome research. In: 12th International Lupin Conference, 14 - 18 September, Perth, Western Australia pp. 255-258.

Tucker, M.A. (2010) Viable solutions for barley powdery mildew. In: 2010 WA Agribusiness Crop Updates, 25 - 26 February, Perth, Western Australia

Conference Item

Ipcho, S.V.S., Hane, J.K., Solomon, P.S. and Oliver, R.P. (2008) Dissecting the infection machinery of Stagonospora nodorum using DNA microarrays. In: 9th International Congress of Plant Pathology ICPP 2008, 24 - 29, Torino, Italy.

Oliver, R.P., Solomon, P.S., Hane, J., Ferguson-Hunt, M., McDonald, B.A., Faris, J. and Friesen, T.L. (2008) Multiple host-specific toxins, lateral gene transfer and gene loss in the evolution of cereal Pleosporalean Pathogens. In: International Conference on Biotic Plant Interactions, 27 - 29 March, Brisbane, Australia.

Oliver, R.P., Solomon, P.S., Hane, J., Ferguson-Hunt, M., McDonald, B.A., Faris, J. and Friesen, T.L. (2008) Multiple host-specific toxins, lateral gene transfer and gene loss in the evolution of cereal Pleosporalean Pathogens. In: 9th International Congress of Plant Pathology ICPP 2008, 24 - 29, Torino, Italy.

Oliver, R.P., Solomon, P.S., Hane, J., Stukenbrock, E.H., McDonald, B.A., Liu, Z., Faris, J.D. and Friesen, T.L. (2007) Interspecific transfer of host-specific toxin genes in Stagonospora nodorum. In: XXIV Fungal Genetics Conference, 20 - 25 March, Pacific Grove, California, USA.

Oliver, R.P., Solomon, P.S., Hane, J.K., Tan, K.C., Lowe, R.G.T., Waters, O.D.C., Stukenbrock, E.H., McDonald, B.A. and Friesen, T.L. (2007) Fungal proteins, metabolites and signalling pathways controlling the interaction between wheat and Stagonospora nodorum. In: XIII International Congress on Molecular Plant-Microbe Interactions, 21 - 27 July, Sorrento, Italy.

Tucker, M., Oliver, R. and Lichtenzveig, J. (2010) Managing fungicide resistance: Protecting Western Australia’s barley crops against Blumeria graminis f. sp. hordei. In: Plant Health & Protection Research Symposium, 29 October, Perth, Western Australia.

van de Wouw, A.P., Cozijnsen, A.J., Hane, J., Brunner, P.C., McDonald, B.A., Oliver, R.P. and Howlett, B.J. (2010) Deletions, repeat-induced point mutations and amino acid substitutions drive evolution of linked effectors in a fungal plant pathogen. In: OzBio, 26 September - 1 October, Melbourne, Australia.

This list was generated on Sat Jan 28 16:49:14 2023 UTC.