Murdoch University Research Repository

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Publications: Health Futures Institute

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Number of items at this level: 41.

Journal Article

Abbiss, H., Gummer, J.P.A., Francki, M. and Trengove, R.D. (2020) Untargeted liquid chromatography-mass spectrometry-based metabolomics analysis of wheat grain. Journal of Visualized Experiments (157).

Abreu, T.C., Hulshof, P.J.M., Boshuizen, H.C., Trijsburg, L., Gray, N. and de Vries, J.H.M. (2020) Validity coefficient of repeated measurements of urinary marker of sugar intake is comparable to urinary nitrogen as marker of protein intake in Free-living subjects. Cancer Epidemiology Biomarkers & Prevention, 30 (1). pp. 193-202.

Belhaj, M.R., Lawler, N.G. and Hoffman, N.J. (2021) Metabolomics and lipidomics: Expanding the molecular landscape of exercise biology. Metabolites, 11 (3). Article 151.

Cale, J.M., Greer, K., Fletcher, S. and Wilton, S.D. (2021) Proof-of-concept: Antisense oligonucleotide mediated skipping of fibrillin-1 exon 52. International Journal of Molecular Sciences, 22 (7). Article 3479.

Casari, I., Manfredi, M., Metharom, P. and Falasca, M. (2021) Dissecting lipid metabolism alterations in SARS-CoV-2. Progress in Lipid Research . Art. 101092.

Chamberlain, C., Gee, G., Gartland, D., Mensah, F.K., Mares, S., Clark, Y., Ralph, N., Atkinson, C., Hirvonen, T., McLachlan, H., Edwards, T., Herrman, H., Brown, S.J. and Nicholson, J.M. (2020) Community perspectives of complex trauma assessment for Aboriginal parents: 'Its important, but how these discussions are held is critical'. Frontiers in Psychology, 11 . Art. 2014.

Ding, N.S., McDonald, J.A.K., Perdones-Montero, A., Rees, D.N., Adegbola, S.O., Misra, R., Hendy, P., Penez, L., Marchesi, J.R., Holmes, E., Sarafian, M.H. and Hart, A.L. (2020) Metabonomics and the gut microbiome associated with primary response to Anti-TNF therapy in Crohn’s Disease. Journal of Crohn's and Colitis, 14 (8). pp. 1090-1102.

Egan, S.L., Ruiz-Aravena, M., Austen, J.M.ORCID: 0000-0002-1826-1634, Barton, X., Comte, S., Hamilton, D.G., Hamede, R.K., Ryan, U.M.ORCID: 0000-0003-2710-9324, Irwin, P.J.ORCID: 0000-0002-0006-8262, Jones, M.E. and Oskam, C.L. (2020) Blood parasites in endangered wildlife - Trypanosomes discovered during a survey of haemoprotozoa from the Tasmanian devil. Pathogens, 9 (11). Article 873.

Elaskalani, O., Domenichini, A., Abdol Razak, N., E. Dye, D., Falasca, M. and Metharom, P. (2020) Antiplatelet drug ticagrelor enhances chemotherapeutic efficacy by targeting the novel P2Y12-AKT Pathway in pancreatic cancer cells. Cancers, 12 (1). Art. 250.

Garcia-Perez, I., Posma, J.M., Serrano-Contreras, J.I., Boulangé, C.L., Chan, Q., Frost, G., Stamler, J., Elliott, P., Lindon, J.C., Holmes, E. and Nicholson, J.K. (2020) Identifying unknown metabolites using NMR-based metabolic profiling techniques. Nature Protocols, 15 . pp. 2538-2567.

Geia, L., Baird, K., Bail, K., Barclay, L., Bennett, J., Best, O., Birks, M., Blackley, L., Blackman, R., Bonner, A., Bryant AO, R., Buzzacott, C., Campbell, S., Catling, C., Chamberlain, C., Cox, L., Cross, W., Cruickshank, M., Cummins, A., Dahlen, H., Daly, J., Darbyshire, P., Davidson, P., Denney-Wilson, E., de Souza, R., Doyle, K., Drummond, A., Duff, J., Duffield, C., Dunning, T., East, L., Elliott, D., Elmir, R., Fergie OAM, D., Ferguson, C., Fernandez, R., Flower AM, D., Foureur, M., Fowler, C., Fry, M., Gorman, E., Grant, J., Gray, J., Halcomb, E., Hart, B., Hartz, D., Hazelton, M., Heaton, L., Hickman, L., Homer AO, C. S. E., Hungerford, C., Hutton, A., Jackson AO, D., Johnson, A., Kelly, M.A., Kitson, A., Knight, S., Levett-Jones, T., Lindsay, D., Lovett, R., Luck, L., Molloy, L., Manias, E., Mannix, J., Marriott, R.ORCID: 0000-0002-6037-2565, Martin, M., Massey, D., McCloughen, A., McGough, S., McGrath, L., Mills, J., Mitchell, B. G., Mohamed, J., Montayre, J., Moroney, T., Moyle, W., Moxham, L., Northam OAM, H., Nowlan, S., O'Brien, A. P., Ogunsiji, O., Paterson, C., Pennington, K., Peters, K., Phillips, J., Power, T., Procter, N., Ramjan, L., Ramsay, N., Rasmussen, B., Rihari-Thomas, J., Rind, B., Robinson, M., Roche, M., Sainsbury, K., Salamonson, Y., Sherwood, J., Shields, L., Sim, J., Skinner, I., Smallwood, G., Smallwood, R., Stewart, L., Taylor, S., Usher AM, K., Virdun, C., Wannell, J., Ward, R., West, C., West, R., Wilkes, L., Williams, R., Wilson, R., Wynaden, D. and Wynne, R. (2020) A unified call to action from Australian nursing and midwifery leaders: Ensuring that Black lives matter. Contemporary Nurse . Latest Article.

Gray, N., Gethings, L.A., Plumb, R.S. and Wilson, I.D. (2020) UHPLC-MS-Based lipidomic and metabonomic investigation of the metabolic phenotypes of wild type and hepatic CYP Reductase Null (HRN) mice. Journal of Pharmaceutical and Biomedical Analysis, 186 . Art. 113318.

Gray, N., Lawler, N.G., Yang, R.ORCID: 0000-0003-2563-2015, Morillon, A-C, Gay, M.C.L., Bong, S-H, Holmes, E., Nicholson, J.K. and Whiley, L.ORCID: 0000-0002-9088-4799 (2020) A simultaneous exploratory and quantitative amino acid and biogenic amine metabolic profiling platform for rapid disease phenotyping via UPLC-QToF-MS. Talanta, 223 (Pt. 2). Art. 121872.

Gupta, N., Partridge, G.J., Buller, N.B., Pilmer, L., Currie, A. and Lymbery, A.J.ORCID: 0000-0002-0542-3446 (2021) Genetic diversity of Australian isolates of Photobacterium damselae subsp. damselae is associated with virulence to yellowtail kingfish (Seriola lalandi). Aquaculture, 538 . Art. 736552.

Ham, K.A.ORCID: 0000-0002-7036-5334, Aung-Htut, M.T., Fletcher, S. and Wilton, S.D. (2020) Nonsequential splicing events alter antisense-mediated exon skipping outcome in COL7A1. International Journal of Molecular Sciences, 21 (20). Article 7705.

James, K., Bottacini, F., Contreras, J.I.S., Vigoureux, M., Egan, M., Motherway, M.O., Holmes, E. and van Sinderen, D. (2020) Author Correction: Metabolism of the predominant human milk oligosaccharide fucosyllactose by an infant gut commensal. Scientific Reports, 10 (1). Art. 17265.

Jamieson, N., Maple, M., Ratnarajah, D. and Usher, K. (2020) Military moral injury: A concept analysis. International Journal of Mental Health Nursing . Early View.

Jiménez, B., Abellona U, M.R., Drymousis, P., Kyriakides, M., Clift, A.K., Liu, D.S.K., Rees, E., Holmes, E., Nicholson, J.K., Kinross, J.M. and Frilling, A. (2021) Neuroendocrine neoplasms: Identification of novel metabolic circuits of potential diagnostic utility. Cancers, 13 (3). Art. 374.

Kimhofer, T., Lodge, S., Whiley, L.ORCID: 0000-0002-9088-4799, Gray, N., Loo, R.L., Lawler, N.G., Nitschke, P., Bong, S-H, Morrison, D.L., Begum, S., Richards, T., Yeap, B.B., Smith, C., Smith, K.G.C., Holmes, E. and Nicholson, J.K. (2020) Integrative modeling of quantitative plasma lipoprotein, metabolic, and amino acid data reveals a multiorgan pathological signature of SARS-CoV-2 infection. Journal of Proteome Research, 19 (11). pp. 4442-4454.

Kotz, J., Marriott, R.ORCID: 0000-0002-6037-2565 and Reid, C. (2020) The EPDS and Australian Indigenous women: A systematic review of the literature. Women and Birth, 34 (2). e128-e134.

Koundouros, N., Karali, E., Tripp, A., Valle, A., Inglese, P., Perry, N.J.S., Magee, D.J., Anjomani Virmouni, S., Elder, G.A., Tyson, A.L., Dória, M.L., van Weverwijk, A., Soares, R.F., Isacke, C.M., Nicholson, J.K., Glen, R.C., Takats, Z. and Poulogiannis, G. (2020) Metabolic Fingerprinting Links Oncogenic PIK3CA with Enhanced Arachidonic Acid-Derived Eicosanoids. Cell, 181 (7). 1596-1611.e27.

Kurbatova, N., Garg, M., Whiley, L.ORCID: 0000-0002-9088-4799, Chekmeneva, E., Jiménez, B., Gómez-Romero, M., Pearce, J., Kimhofer, T., D’Hondt, E., Soininen, H., Kłoszewska, I., Mecocci, P., Tsolaki, M., Vellas, B., Aarsland, D., Nevado-Holgado, A., Liu, B., Snowden, S., Proitsi, P., Ashton, N.J., Hye, A., Legido-Quigley, C., Lewis, M.R., Nicholson, J.K., Holmes, E., Brazma, A. and Lovestone, S. (2020) Urinary metabolic phenotyping for Alzheimer’s disease. Scientific Reports, 10 (1). Art. 21745.

Lau, C.-H.E., Taylor-Bateman, V., Vorkas, P.A., Graça, G., Vu, T.-H.T., Hou, L., Chekmeneva, E., Ebbels, T.M.D., Chan, Q., Van Horn, L. and Holmes, E. (2020) Metabolic signatures of gestational weight gain and postpartum weight loss in a lifestyle intervention study of overweight and obese women. Metabolites, 10 (12). Article 498.

Lawler, N.G., Gray, N., Kimhofer, T., Boughton, B.ORCID: 0000-0001-6342-9814, Gay, M., Yang, R.ORCID: 0000-0003-2563-2015, Morillon, A-C, Chin, S-T, Ryan, M., Begum, S., Bong, S.H., Coudert, J.D., Edgar, D., Raby, E., Pettersson, S., Richards, T., Holmes, E., Whiley, L.ORCID: 0000-0002-9088-4799 and Nicholson, J.K. (2021) Systemic Perturbations in Amine and Kynurenine Metabolism Associated with Acute SARS-CoV-2 Infection and Inflammatory Cytokine Responses. Journal of Proteome Research .

Letertre, M.P.M., Munjoma, N., Wolfer, K., Pechlivanis, A., McDonald, J.A.K., Hardwick, R.N., Cherrington, N.J., Coen, M., Nicholson, J.K., Hoyles, L., Swann, J.R. and Wilson, I.D. (2020) A Two-Way interaction between Methotrexate and the Gut Microbiota of Male Sprague–Dawley Rats. Journal of Proteome Research, 19 (8). pp. 3326-3339.

Letertre, M.P.M., Myridakis, A., Whiley, L.ORCID: 0000-0002-9088-4799, Camuzeaux, S., Lewis, M.R., Chappell, K.E., Thaikkatil, A., Dumas, M-E, Nicholson, J.K., Swann, J.R. and Wilson, I.D. (2021) A targeted ultra performance liquid chromatography – Tandem mass spectrometric assay for tyrosine and metabolites in urine and plasma: Application to the effects of antibiotics on mice. Journal of Chromatography B, 1164 . Art. 122511.

Litton, E., Anstey, M., Broadhurst, D., Chapman, A., Currie, A., Ferrier, J., Gummer, J., Higgins, A., Lim, J., Manning, L., Myers, E., Orr, K., Palermo, A-M, Paparini, A.ORCID: 0000-0002-1105-5184, Pellicano, S., Raby, E., Rammohan, A., Regli, A., Richter, B., Salman, S., Strunk, T., Waterson, S., Weight, D., Wibrow, B. and Wood, F. (2021) Early and sustained Lactobacillus plantarum probiotic therapy in critical illness: the randomised, placebo-controlled, restoration of gut microflora in critical illness trial (ROCIT). Intensive Care Medicine .

Lodge, S., Nitschke, P., Kimhofer, T., Coudert, J.D., Begum, S., Bong, S-H, Richards, T., Edgar, D., Raby, E., Spraul, M., Schaefer, H., Lindon, J.C., Loo, R.L., Holmes, E. and Nicholson, J.K. (2021) NMR spectroscopic windows on the systemic effects of SARS-CoV-2 infection on plasma lipoproteins and metabolites in relation to circulating cytokines. Journal of Proteome Research, 20 (2). pp. 1382-1396.

Lodge, S., Nitschke, P., Kimhofer, T., Wist, J., Bong, S-H, Loo, R.L., Masuda, R., Begum, S., Richards, T., Lindon, J.C., Bermel, W., Reinsperger, T., Schaefer, H., Spraul, M., Holmes, E. and Nicholson, J.K. (2021) Diffusion and relaxation edited Proton NMR Spectroscopy of plasma reveals a High-Fidelity supramolecular biomarker signature of SARS-CoV-2 infection. Analytical Chemistry, 93 (8). pp. 3976-3986.

Lodge, S., Nitschke, P., Loo, R.L., Kimhofer, T., Bong, S-H, Richards, T., Begum, S., Spraul, M., Schaefer, H., Lindon, J.C., Holmes, E. and Nicholson, J.K. (2021) Low volume in Vitro diagnostic proton NMR Spectroscopy of human blood plasma for lipoprotein and metabolite analysis: Application to SARS-CoV-2 biomarkers. Journal of Proteome Research, 20 (2). pp. 1415-1423.

Loo, R.L., Chan, Q., Antti, H., Li, J.V., Ashrafian, H., Elliott, P., Stamler, J., Nicholson, J.K., Holmes, E., Wist, J. and Wren, J. (2020) Strategy for improved characterization of human metabolic phenotypes using a COmbined Multi-block principal components analysis with statistical spectroscopy (COMPASS). Bioinformatics, 36 (21). pp. 5229-5236.

Loo, R.L., Lodge, S., Kimhofer, T., Bong, S-H, Begum, S., Whiley, L.ORCID: 0000-0002-9088-4799, Gray, N., Lindon, J.C., Nitschke, P., Lawler, N.G., Schäfer, H., Spraul, M., Richards, T., Nicholson, J.K. and Holmes, E. (2020) Quantitative In-Vitro diagnostic NMR spectroscopy for lipoprotein and metabolite measurements in plasma and serum: Recommendations for analytical artifact minimization with special reference to COVID-19/SARS-CoV-2 Samples. Journal of Proteome Research, 19 (11). pp. 4428-4441.

Martinez-Gili, L., McDonald, J.A.K., Liu, Z., Kao, D., Allegretti, J.R., Monaghan, T.M., Barker, G.F., Miguéns Blanco, J., Williams, H.R.T., Holmes, E., Thursz, M.R., Marchesi, J.R. and Mullish, B.H. (2020) Understanding the mechanisms of efficacy of fecal microbiota transplant in treating recurrent Clostridioides difficile infection and beyond: the contribution of gut microbial-derived metabolites. Gut Microbes, 12 (1). Art. 1810531.

Seyfried, F., Phetcharaburanin, J., Glymenaki, M., Nordbeck, A., Hankir, M., Nicholson, J.K., Holmes, E., Marchesi, J.R. and Li, J.V. (2021) Roux-en-Y gastric bypass surgery in Zucker rats induces bacterial and systemic metabolic changes independent of caloric restriction-induced weight loss. Gut Microbes, 13 (1). pp. 1-20.

Thøgersen, R., Castro-Mejía, J.L., Kræmer Sundekilde, U., Hansen, L.H., Gray, N., Kuhnle, G., Jørgensen, N.R., Hansen, A.K., Nielsen, D.S. and Bertram, H.C. (2020) Inulin and milk mineral fortification of a pork sausage exhibits distinct effects on the microbiome and biochemical activity in the gut of healthy rats. Food Chemistry, 331 . Art. 127291.

Vonhof, E.V., Piotto, M., Holmes, E., Lindon, J.C., Nicholson, J.K. and Li, J.V. (2020) Improved spatial resolution of metabolites in tissue biopsies using high-resolution Magic-Angle-Spinning slice localization NMR spectroscopy. Analytical Chemistry, 92 (17). pp. 11516-11519.

Whife, C.J., Vallence, A-MORCID: 0000-0001-9190-6366, Edgar, D.W. and Wood, F.M. (2020) Decreased neuroplasticity in minor burn injury survivors compared to non-injured adults: A pilot study in burn injury survivors aged 45 years and older. Burns, 47 (2). pp. 327-337.

Whiley, L.ORCID: 0000-0002-9088-4799, Chappell, K.E., D’Hondt, E., Lewis, M.R., Jiménez, B., Snowden, S.G., Soininen, H., Kłoszewska, I., Mecocci, P., Tsolaki, M., Vellas, B., Swann, J.R., Hye, A., Lovestone, S., Legido-Quigley, C. and Holmes, E. (2021) Metabolic phenotyping reveals a reduction in the bioavailability of serotonin and kynurenine pathway metabolites in both the urine and serum of individuals living with Alzheimer’s disease. Alzheimer's Research & Therapy, 13 (1). Art. 20.

Yang, R.ORCID: 0000-0003-2563-2015, Brice, B., Berto, B.P. and Ryan, U.M.ORCID: 0000-0003-2710-9324 (2020) Morphological and genetic characterization of Eimeria chalcoptereae n. sp. (Apicomplexa: Eimeriidae) in a common bronzewing pigeon (Phaps chalcoptera) (Latham, 1790) in Western Australia. Parasitology Research .

Yang, R.ORCID: 0000-0003-2563-2015, Brice, B., Liu, Q., Berto, B.P., Austen, J.ORCID: 0000-0002-1826-1634 and Ryan, U.M.ORCID: 0000-0003-2710-9324 (2021) Morphological and genetic characterization of the first Isospora species (I. lugensae n. sp.) from a Kerguelen petrel (Lugensa brevirostris). Parasitology Research .

Conference Item

Boesecke, C., Kimhofer, T., Tocha, C., Schubert, O., Rybak, R., Kuhlen, K., Klaes, C. and Rockstroh, J.K. (2021) Are we reaching the at-risk patient populations for HIV and other STI? In: Conference on Retroviruses and Opportunistic Infections, 6 - 10 March 2021, Virtual.

This list was generated on Mon Apr 19 13:30:23 2021 UTC.