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Publications: Health Futures Institute

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Number of items at this level: 80.

2021

Belhaj, M.R., Lawler, N.G. and Hoffman, N.J. (2021) Metabolomics and lipidomics: Expanding the molecular landscape of exercise biology. Metabolites, 11 (3). Article 151.

Bergamaschi, L., Mescia, F., Turner, L., Hanson, A.L., Kotagiri, P., Dunmore, B.J., Ruffieux, H., De Sa, A., Huhn, O., Morgan, M.D., Gerber, P.P., Wills, M.R., Baker, S., Calero‐Nieto, F. J., Doffinger, R., Dougan, G., Elmer, A., Goodfellow, I.G., Gupta, R.K., Hosmillo, M., Hunter, K., Kingston, N., Lehner, P.J., Matheson, N.J., Nicholson, J.K., Petrunkina, A.M., Richardson, S., Saunders, C., Thaventhiran, J.E.D., Toonen, E.J.M., Weekes, M.P., Göttgens, B., Toshner, M., Hess, C., Bradley, J.R., Lyons, P.A. and Smith, K.G.C. (2021) Longitudinal analysis reveals that delayed bystander CD8+ T cell activation and early immune pathology distinguish severe COVID-19 from mild disease. Immunity, 54 (6). 1257-1275.e8.

Blaise, B.J., Correia, G.D.S., Haggart, G.A., Surowiec, I., Sands, C., Lewis, M.R., Pearce, J.T.M., Trygg, J., Nicholson, J.K., Holmes, E. and Ebbels, T.M.D. (2021) Statistical analysis in metabolic phenotyping. Nature Protocols .

Boesecke, C., Kimhofer, T., Tocha, C., Schubert, O., Rybak, R., Kuhlen, K., Klaes, C. and Rockstroh, J.K. (2021) Are we reaching the at-risk patient populations for HIV and other STI? In: Conference on Retroviruses and Opportunistic Infections, 6 - 10 March 2021, Virtual.

Bose, T., Hulbert, J.M., Burgess, T.I.ORCID: 0000-0002-7962-219X, Paap, T., Roets, F. and Wingfield, M.J. (2021) Two novel Phytophthora species from the southern tip of Africa. Mycological Progress, 20 (6). pp. 755-767.

Cale, J.M., Greer, K., Fletcher, S. and Wilton, S.D. (2021) Proof-of-concept: Antisense oligonucleotide mediated skipping of fibrillin-1 exon 52. International Journal of Molecular Sciences, 22 (7). Article 3479.

Cale, Jessica M. (2021) Antisense oligonucleotide-mediated alternative splicing strategies to treat the type-1 fibrillinopathies. PhD thesis, Murdoch University.

Casari, I., Manfredi, M., Metharom, P. and Falasca, M. (2021) Dissecting lipid metabolism alterations in SARS-CoV-2. Progress in Lipid Research, 82 . Art. 101092.

Chatterjee, P., Pedrini, S., Ashton, N.J., Tegg, M., Goozee, K., Singh, A.K., Karikari, T.K., Simrén, J., Vanmechelen, E., Armstrong, N.J.ORCID: 0000-0002-4477-293X, Hone, E., Asih, P.R., Taddei, K., Doré, V., Villemagne, V.L., Sohrabi, H.R.ORCID: 0000-0001-8017-8682, Zetterberg, H., Masters, C.L., Blennow, K. and Martins, R.N. (2021) Diagnostic and prognostic plasma biomarkers for preclinical Alzheimer's disease. Alzheimer's & Dementia . Early View.

Doecke, J.D., Francois, C., Fowler, C.J., Stoops, E., Bourgeat, P., Rainey-Smith, S.R., Li, Q-X, Masters, C.L., Martins, R.N., Villemagne, V.L., Collins, S.J. and Vanderstichele, H.M. (2021) Core Alzheimer’s disease cerebrospinal fluid biomarker assays are not affected by aspiration or gravity drip extraction methods. Alzheimer's Research & Therapy, 13 (1). Art. 79.

Flynn, L.L., Mitrpant, C., Adams, A., Pitout, I.L., Stirnweiss, A., Fletcher, S. and Wilton, S.D. (2021) Targeted SMN exon skipping: A useful control to assess in vitro and in vivo splice-switching studies. Biomedicines, 9 (5). Article 552.

Fowler, C., Rainey-Smith, S.R., Bird, S., Bomke, J., Bourgeat, P., Brown, B.M.ORCID: 0000-0001-7927-2540, Burnham, S.C., Bush, A.I., Chadunow, C., Collins, S., Doecke, J., Doré, V., Ellis, K.A., Evered, L., Fazlollahi, A., Fripp, J., Gardener, S.L., Gibson, S., Grenfell, R., Harrison, E., Head, R., Jin, L., Kamer, A., Lamb, F., Lautenschlager, N.T., Laws, S.M., Li, Q-X, Lim, L., Lim, Y.Y., Louey, A., Macaulay, S.L., Mackintosh, L., Martins, R.N., Maruff, P., Masters, C.L., McBride, S., Milicic, L., Peretti, M., Pertile, K., Porter, T., Radler, M., Rembach, A., Robertson, J., Rodrigues, M., Rowe, C.C., Rumble, R., Salvado, O., Savage, G., Silbert, B., Soh, M., Sohrabi, H.R.ORCID: 0000-0001-8017-8682, Taddei, K., Taddei, T., Thai, C., Trounson, B., Tyrrell, R., Vacher, M., Varghese, S., Villemagne, V.L., Weinborn, M., Woodward, M., Xia, Y. and Ames, D. (2021) Fifteen years of the Australian Imaging, Biomarkers and Lifestyle (AIBL) Study: Progress and observations from 2,359 older adults spanning the spectrum from cognitive normality to Alzheimer’s Disease. Journal of Alzheimer's Disease Reports, 5 (1). pp. 443-468.

Gethings, L.A., Gray, N., Plumb, R.S. and Wilson, I.D. (2021) Proteomic consequences of the deletion of cytochrome P450 (CYP450) reductase in mice. Journal of Chromatography B, 1179 . Art. 122803.

Gomez, M.V., Ruiz-Castañeda, M., Nitschke, P., Gschwind, R.M. and Jiménez, M.A. (2021) Insights into the micelle-induced β-hairpin-to-α-helix transition of a LytA-derived peptide by photo-CIDNP spectroscopy. International Journal of Molecular Sciences, 22 (13). Article 6666.

Gozt, A.K., Hellewell, S.C., Thorne, J., Thomas, E., Buhagiar, F., Markovic, S., Van Houselt, A., Ring, A., Arendts, G., Smedley, B., Van Schalkwyk, S., Brooks, P., Iliff, J., Celenza, A., Mukherjee, A., Xu, D., Robinson, S., Honeybul, S., Cowen, G., Licari, M., Bynevelt, M., Pestell, C.F., Fatovich, D. and Fitzgerald, M. (2021) Predicting outcome following mild traumatic brain injury: protocol for the longitudinal, prospective, observational Concussion Recovery (CREST) cohort study. BMJ Open, 11 (5). e046460.

Gray, N., Lawler, N., Zeng, A., Ryan, M., Bong, S-H, Boughton, B.ORCID: 0000-0001-6342-9814, Bizkarguenaga, M., Bruzzone, C., Embade, N., Wist, J., Holmes, E., Millet, O., Nicholson, J. and Whiley, L.ORCID: 0000-0002-9088-4799 (2021) Diagnostic potential of the plasma lipidome in infectious disease: Application to acute SARS-CoV-2 infection. Metabolites, 11 (7). Article 467.

Gray, N., Lawler, N.G., Yang, R.ORCID: 0000-0003-2563-2015, Morillon, A-C, Gay, M.C.L., Bong, S-H, Holmes, E., Nicholson, J.K. and Whiley, L.ORCID: 0000-0002-9088-4799 (2021) A simultaneous exploratory and quantitative amino acid and biogenic amine metabolic profiling platform for rapid disease phenotyping via UPLC-QToF-MS. Talanta, 223 (Pt. 2). Article 121872.

Gupta, N., Partridge, G.J., Buller, N.B., Pilmer, L., Currie, A. and Lymbery, A.J.ORCID: 0000-0002-0542-3446 (2021) Genetic diversity of Australian isolates of Photobacterium damselae subsp. damselae is associated with virulence to yellowtail kingfish (Seriola lalandi). Aquaculture, 538 . Art. 736552.

Ham, K.A.ORCID: 0000-0002-7036-5334, Keegan, N.P., McIntosh, C.S., Aung-Htut, M.T., Zaw, K., Greer, K., Fletcher, S. and Wilton, S.D. (2021) Induction of cryptic pre-mRNA splice-switching by antisense oligonucleotides. Scientific Reports, 11 (1). Art. 15137.

Holmes, E., Wist, J., Masuda, R., Lodge, S., Nitschke, P., Kimhofer, T., Loo, R.L., Begum, S., Boughton, B.ORCID: 0000-0001-6342-9814, Yang, R.ORCID: 0000-0003-2563-2015, Morillon, A-C, Chin, S-T, Hall, D., Ryan, M., Bong, S-H, Gay, M., Edgar, D.W., Lindon, J.C., Richards, T., Yeap, B.B., Pettersson, S., Spraul, M., Schaefer, H., Lawler, N.G., Gray, N., Whiley, L.ORCID: 0000-0002-9088-4799 and Nicholson, J.K. (2021) Incomplete systemic recovery and metabolic phenoreversion in Post-Acute-Phase nonhospitalized COVID-19 Patients: Implications for assessment of Post-Acute COVID-19 syndrome. Journal of Proteome Research, 20 (6). pp. 3315-3329.

Huang, D., Zhang, D., Chen, S-C, Aung-Htut, M.T., Lamey, T.M., Thompson, J.A., McLaren, T.L., De Roach, J.N., Fletcher, S., Wilton, S.D., Chen, F.K. and McLenachan, S. (2021) Generation of two induced pluripotent stem cell lines from a patient with Stargardt disease caused by compound heterozygous mutations in the ABCA4 gene. Stem Cell Research, 54 . Art. 102448.

Huang, D., Zhang, D., Chen, S-C, Thandar Aung-Htut, M., Lamey, T.M., Thompson, J.A., McLaren, T.L., De Roach, J.N., Fletcher, S., Wilton, S.D., McLenachan, S. and Chen, F.K. (2021) Generation of an induced pluripotent stem cell line from a patient with Stargardt disease caused by biallelic c.[5461–10T>C;5603A>T];[6077T>C] mutations in the ABCA4 gene. Stem Cell Research, 54 . Art. 102439.

Jiménez, B., Abellona U, M.R., Drymousis, P., Kyriakides, M., Clift, A.K., Liu, D.S.K., Rees, E., Holmes, E., Nicholson, J.K., Kinross, J.M. and Frilling, A. (2021) Neuroendocrine neoplasms: Identification of novel metabolic circuits of potential diagnostic utility. Cancers, 13 (3). Art. 374.

Lawler, N.G., Gray, N., Kimhofer, T., Boughton, B.ORCID: 0000-0001-6342-9814, Gay, M., Yang, R.ORCID: 0000-0003-2563-2015, Morillon, A-C, Chin, S-T, Ryan, M., Begum, S., Bong, S-H, Coudert, J.D., Edgar, D., Raby, E., Pettersson, S., Richards, T., Holmes, E., Whiley, L.ORCID: 0000-0002-9088-4799 and Nicholson, J.K. (2021) Systemic perturbations in amine and kynurenine metabolism associated with acute SARS-CoV-2 infection and inflammatory cytokine responses. Journal of Proteome Research, 20 (5). pp. 2796-2811.

Learmonth, Y.C.ORCID: 0000-0002-4857-8480, Pilutti, L.A., Herring, M.P., Motl, R.W., Chan, B.ORCID: 0000-0001-5032-2815 and Metse, A.P.ORCID: 0000-0002-8641-1024 (2021) Safety of exercise training in multiple sclerosis: A protocol for an updated systematic review and meta-analysis. Systematic Reviews, 10 . Article number: 208.

Letertre, M.P.M., Myridakis, A., Whiley, L.ORCID: 0000-0002-9088-4799, Camuzeaux, S., Lewis, M.R., Chappell, K.E., Thaikkatil, A., Dumas, M-E, Nicholson, J.K., Swann, J.R. and Wilson, I.D. (2021) A targeted ultra performance liquid chromatography – Tandem mass spectrometric assay for tyrosine and metabolites in urine and plasma: Application to the effects of antibiotics on mice. Journal of Chromatography B, 1164 . Art. 122511.

Lewis, D.M.G. and Buss, D.M. (2021) Appearance enhancement: A cue-based approach. Archives of Sexual Behavior .

Li, D., McIntosh, C.S., Mastaglia, F.L., Wilton, S.D. and Aung-Htut, M.T. (2021) Neurodegenerative diseases: A hotbed for splicing defects and the potential therapies. Translational Neurodegeneration, 10 (1). Art. 16.

Li, J.V., Ashrafian, H., Sarafian, M., Homola, D., Rushton, L., Barker, G., Cabrera, P.M., Lewis, M.R., Darzi, A., Lin, E., Gletsu-Miller, N.A., Atkin, S.L., Sathyapalan, T., Gooderham, N.J., Nicholson, J.K., Marchesi, J.R., Athanasiou, T. and Holmes, E. (2021) Roux-en-Y gastric bypass-induced bacterial perturbation contributes to altered host-bacterial co-metabolic phenotype. Microbiome, 9 (1). Art. 139.

Litton, E., Anstey, M., Broadhurst, D., Chapman, A., Currie, A., Ferrier, J., Gummer, J., Higgins, A., Lim, J., Manning, L., Myers, E., Orr, K., Palermo, A-M, Paparini, A.ORCID: 0000-0002-1105-5184, Pellicano, S., Raby, E., Rammohan, A., Regli, A., Richter, B., Salman, S., Strunk, T., Waterson, S., Weight, D., Wibrow, B. and Wood, F. (2021) Early and sustained Lactobacillus plantarum probiotic therapy in critical illness: the randomised, placebo-controlled, restoration of gut microflora in critical illness trial (ROCIT). Intensive Care Medicine .

Liu, D., Brice, B., Elliot, A. and Yang, R.ORCID: 0000-0003-2563-2015 (2021) Morphological and molecular characterization of Isospora amphiboluri (Apicomplexa: Eimeriidae), a coccidian parasite, in a central netted dragon (Ctenophorus nuchalis) (De Vis, 1884) in Australia. Parasitology International, 84 . Art. 102386.

Lodge, S., Nitschke, P., Kimhofer, T., Coudert, J.D., Begum, S., Bong, S-H, Richards, T., Edgar, D., Raby, E., Spraul, M., Schaefer, H., Lindon, J.C., Loo, R.L., Holmes, E. and Nicholson, J.K. (2021) NMR spectroscopic windows on the systemic effects of SARS-CoV-2 infection on plasma lipoproteins and metabolites in relation to circulating cytokines. Journal of Proteome Research, 20 (2). pp. 1382-1396.

Lodge, S., Nitschke, P., Kimhofer, T., Wist, J., Bong, S-H, Loo, R.L., Masuda, R., Begum, S., Richards, T., Lindon, J.C., Bermel, W., Reinsperger, T., Schaefer, H., Spraul, M., Holmes, E. and Nicholson, J.K. (2021) Diffusion and relaxation edited Proton NMR Spectroscopy of plasma reveals a High-Fidelity supramolecular biomarker signature of SARS-CoV-2 infection. Analytical Chemistry, 93 (8). pp. 3976-3986.

Lodge, S., Nitschke, P., Loo, R.L., Kimhofer, T., Bong, S-H, Richards, T., Begum, S., Spraul, M., Schaefer, H., Lindon, J.C., Holmes, E. and Nicholson, J.K. (2021) Low volume in Vitro diagnostic proton NMR Spectroscopy of human blood plasma for lipoprotein and metabolite analysis: Application to SARS-CoV-2 biomarkers. Journal of Proteome Research, 20 (2). pp. 1415-1423.

Loneragan, N.R., Wiryawan, B., Hordyk, A., Halim, A., Proctor, C., Satria, F. and Yulianto, I. (2021) Conclusions on potential management procedures for seven data-limited fisheries. In: Loneragan, N.R., Wiryawan, B., Hordyk, A., Halim, A., Proctor, C., Satria, F. and Yulianto, I., (eds.) Proceedings from Workshops on Management Strategy Evaluation of Data-Limited Fisheries: Towards Sustainability – Applying the Method Evaluation and Risk Assessment Tool to Seven Indonesian Fisheries. Murdoch University, Western Australia, and IPB University, Indonesia, pp. 169-185.

Masuda, R., Lodge, S., Nitschke, P., Spraul, M., Schaefer, H., Bong, S-H, Kimhofer, T., Hall, D., Loo, R.L., Bizkarguenaga, M., Bruzzone, C., Gil-Redondo, R., Embade, N., Mato, J.M., Holmes, E., Wist, J., Millet, O. and Nicholson, J.K. (2021) Integrative modeling of plasma metabolic and lipoprotein biomarkers of SARS-CoV-2 infection in Spanish and Australian COVID-19 patient cohorts. Journal of Proteome Research, 20 (8). pp. 4139-4152.

Nicholson, J.K. (2021) Molecular phenomic approaches to deconvolving the systemic effects of SARS-CoV-2 infection and Post-acute COVID-19 syndrome. Phenomics .

Norton, J.O., Evans, K.C., Semchenko, A.Y., Al-Shawaf, L. and Lewis, D.M.G. (2021) Why do people (not) engage in social distancing? Proximate and ultimate analyses of Norm-Following during the COVID-19 pandemic. Frontiers in Psychology, 12 . Art. 648206.

Osborne, T., Edgar, D., Gittings, P., Wood, F., Le Huray, T., Allan, B., Scott, B.R.ORCID: 0000-0002-2484-4019 and Wall, B. (2021) A prospective pilot study of the energy balance profiles in acute non-severe burn patients. Burns . In Press.

Plumb, R.S., Gethings, L.A., King, A., Mullin, L.G., Maker, G.ORCID: 0000-0003-1666-9377, Trengove, R. and Wilson, I.D. (2021) Hybrid organic/inorganic hybrid surface technology for increasing the performance of LC/MS(MS)-based drug metabolite identification studies: Application to gefitinib and metabolites in mouse plasma and urine. Journal of Pharmaceutical and Biomedical Analysis, 200 . Article 114076.

Pugh, J.D., McCoy, K., Needham, M., Jiang, L., Giles, M., McKinnon, E. and Heine, K. (2021) Evaluation of an Australian neurological nurse‐led model of postdischarge care. Health & Social Care in the Community . Early View.

Richman, T.R., Ermer, J.A., Siira, S.J., Kuznetsova, I., Brosnan, C.A., Rossetti, G., Baker, J., Perks, K.L., Cserne Szappanos, H., Viola, H.M., Gray, N., Larance, M., Hool, L.C., Zuryn, S., Rackham, O. and Filipovska, A. (2021) Mitochondrial mistranslation modulated by metabolic stress causes cardiovascular disease and reduced lifespan. Aging Cell, 20 (7). Art. e13408.

Rurak, B.K., Rodrigues, J.P., Power, B.D., Drummond, P.D.ORCID: 0000-0002-3711-8737 and Vallence, A.M.ORCID: 0000-0001-9190-6366 (2021) Reduced Cerebellar Brain Inhibition Measured Using Dual-Site TMS in Older Than in Younger Adults. The Cerebellum .

Rurak, B.K., Rodrigues, J.P., Power, B.D., Drummond, P.D.ORCID: 0000-0002-3711-8737 and Vallence, A.M.ORCID: 0000-0001-9190-6366 (2021) Reduced SMA‐M1 connectivity in older than younger adults measured using dual‐site TMS. European Journal of Neuroscience . Early View.

Rurak, B.K., Rodrigues, J.P., Power, B.D., Drummond, P.D.ORCID: 0000-0002-3711-8737 and Vallence, A.M.ORCID: 0000-0001-9190-6366 (2021) Test Re-test reliability of Dual-site TMS measures of SMA-M1 connectivity differs across Inter-stimulus intervals in younger and older adults. Neuroscience, 472 . pp. 11-24.

Salahin, N., Jahiruddin, M., Islam, M.R., Alam, Md.K., Haque, M.E., Ahmed, S., Baazeem, A., Hadifa, A., EL Sabagh, A. and Bell, R.W.ORCID: 0000-0002-7756-3755 (2021) Establishment of crops under minimal soil disturbance and crop residue retention in rice-based cropping system: Yield advantage, soil health improvement, and economic benefit. Land, 10 (6). Article 581.

Seyfried, F., Phetcharaburanin, J., Glymenaki, M., Nordbeck, A., Hankir, M., Nicholson, J.K., Holmes, E., Marchesi, J.R. and Li, J.V. (2021) Roux-en-Y gastric bypass surgery in Zucker rats induces bacterial and systemic metabolic changes independent of caloric restriction-induced weight loss. Gut Microbes, 13 (1). pp. 1-20.

Shafaei, A., Vamathevan, V., Pandohee, J., Lawler, N.G., Broadhurst, D. and Boyce, M.C. (2021) Sensitive and quantitative determination of short-chain fatty acids in human serum using liquid chromatography mass spectrometry. Analytical and Bioanalytical Chemistry .

Tian, J., Adams, M.J.ORCID: 0000-0002-7743-4515, Tay, J.W.T., James, I., Powell, S., Hughes, Q.W., Gilmore, G., Baker, R.I. and Tiao, J.Y-H. (2021) Estradiol-Responsive miR-365a-3p Interacts with Tissue Factor 3′UTR to Modulate Tissue Factor-Initiated Thrombin Generation. Thrombosis and Haemostasis .

Wang, K., Goldenberg, A., Dorison, C.A., Miller, J.K., Uusberg, A., Lerner, J.S., Gross, J.J., Agesin, B.B., Bernardo, M., Campos, O., Eudave, L., Grzech, K., Ozery, D.H., Jackson, E.A., Garcia, E.O.L., Drexler, S.M., Jurković, A.P., Rana, K., Wilson, J.P., Antoniadi, M., Desai, K., Gialitaki, Z., Kushnir, E., Nadif, K., Bravo, O.N., Nauman, R., Oosterlinck, M., Pantazi, M., Pilecka, N., Szabelska, A., van Steenkiste, I.M.M., Filip, K., Bozdoc, A.I., Marcu, G.M., Agadullina, E., Adamkovič, M., Roczniewska, M., Reyna, C., Kassianos, A.P., Westerlund, M., Ahlgren, L., Pöntinen, S., Adetula, G.A., Dursun, P., Arinze, A.I., Arinze, N.C., Ogbonnaya, C.E., Ndukaihe, I.L.G., Dalgar, I., Akkas, H., Macapagal, P.M., Lewis, S., Metin-Orta, I., Foroni, F., Willis, M., Santos, A.C., Mokady, A., Reggev, N., Kurfali, M.A., Vasilev, M.R., Nock, N.L., Parzuchowski, M., Espinoza Barría, M.F., Vranka, M., Kohlová, M.B., Ropovik, I., Harutyunyan, M., Wang, C., Yao, E., Becker, M., Manunta, E., Kaminski, G., Marko, D., Evans, K., Lewis, D.M.G., Findor, A., Landry, A.T., Aruta, J.J.B., Ortiz, M.S., Vally, Z., Pronizius, E., Voracek, M., Lamm, C., Grinberg, M., Li, R., Valentova, J.V., Mioni, G., Cellini, N., Chen, S-C, Zickfeld, J., Moon, K., Azab, H., Levy, N., Karababa, A., Beaudry, J.L., Boucher, L., Collins, W.M., Todsen, A.L., van Schie, K., Vintr, J., Bavolar, J., Kaliska, L., Križanić, V., Samojlenko, L., Pourafshari, R., Geiger, S.J., Beitner, J., Warmelink, L., Ross, R.M., Stephen, I.D., Hostler, T.J., Azouaghe, S., McCarthy, R., Szala, A., Grano, C., Solorzano, C.S., Anjum, G., Jimenez-Leal, W., Bradford, M., Pérez, L.C., Cruz Vásquez, J.E., Galindo-Caballero, O.J., Vargas-Nieto, J.C., Kácha, O., Arvanitis, A., Xiao, Q., Cárcamo, R., Zorjan, S., Tajchman, Z., Vilares, I., Pavlacic, J.M., Kunst, J.R., Tamnes, C.K., von Bastian, C.C., Atari, M., Sharifian, M., Hricova, M., Kačmár, P., Schrötter, J., Rahal, R-M, Cohen, N., FatahModarres, S., Zrimsek, M., Zakharov, I., Koehn, M.A., Esteban-Serna, C., Calin-Jageman, R.J., Krafnick, A.J., Štrukelj, E., Isager, P.M., Urban, J., Silva, J.R., Martončik, M., Očovaj, S.B., Šakan, D., Kuzminska, A.O., Djordjevic, J.M., Almeida, I.A.T., Ferreira, A., Lazarevic, L.B., Manley, H., Ricaurte, D.Z., Monteiro, R.P., Etabari, Z., Musser, E., Dunleavy, D., Chou, W., Godbersen, H., Ruiz-Fernández, S., Reeck, C., Batres, C., Kirgizova, K., Muminov, A., Azevedo, F., Alvarez, D.S., Butt, M.M., Lee, J.M., Chen, Z., Verbruggen, F., Ziano, I., Tümer, M., Charyate, A.C.A., Dubrov, D., Tejada Rivera, M.d.C.M.C., Aberson, C., Pálfi, B., Maldonado, M.A., Hubena, B., Sacakli, A., Ceary, C.D., Richard, K.L., Singer, G., Perillo, J.T., Ballantyne, T., Cyrus-Lai, W., Fedotov, M., Du, H., Wielgus, M., Pit, I.L., Hruška, M., Sousa, D., Aczel, B., Szaszi, B., Adamus, S., Barzykowski, K., Micheli, L., Schmidt, N-D, Zsido, A.N., Paruzel-Czachura, M., Bialek, M., Kowal, M., Sorokowska, A., Misiak, M., Mola, D., Ortiz, M.V., Correa, P.S., Belaus, A., Muchembled, F., Ribeiro, R.R., Arriaga, P., Oliveira, R., Vaughn, L.A., Szwed, P., Kossowska, M., Czarnek, G., Kielińska, J., Antazo, B., Betlehem, R., Stieger, S., Nilsonne, G., Simonovic, N., Taber, J., Gourdon-Kanhukamwe, A., Domurat, A., Ihaya, K., Yamada, Y., Urooj, A., Gill, T., Čadek, M., Bylinina, L., Messerschmidt, J., Kurfalı, M., Adetula, A., Baklanova, E., Albayrak-Aydemir, N., Kappes, H.B., Gjoneska, B., House, T., Jones, M.V., Berkessel, J.B., Chopik, W.J., Çoksan, S., Seehuus, M., Khaoudi, A., Bokkour, A., El Arabi, K.A., Djamai, I., Iyer, A., Parashar, N., Adiguzel, A., Kocalar, H.E., Bundt, C., Norton, J.O., Papadatou-Pastou, M., De la Rosa-Gomez, A., Ankushev, V., Bogatyreva, N., Grigoryev, D., Ivanov, A., Prusova, I., Romanova, M., Sarieva, I., Terskova, M., Hristova, E., Kadreva, V.H., Janak, A., Schei, V., Sverdrup, T.E., Askelund, A.D., Pineda, L.M.S., Krupić, D., Levitan, C.A., Johannes, N., Ouherrou, N., Say, N., Sinkolova, S., Janjić, K., Stojanovska, M., Stojanovska, D., Khosla, M., Thomas, A.G., Kung, F.Y.H., Bijlstra, G., Mosannenzadeh, F., Balci, B.B., Reips, U-D, Baskin, E., Ishkhanyan, B., Czamanski-Cohen, J., Dixson, B.J.W., Moreau, D., Sutherland, C.A.M., Chuan-Peng, H., Noone, C., Flowe, H., Anne, M., Janssen, S.M.J., Topor, M., Majeed, N.M., Kunisato, Y., Yu, K., Daches, S., Hartanto, A., Vdovic, M., Anton-Boicuk, L., Forbes, P.A.G., Kamburidis, J., Marinova, E., Nedelcheva-Datsova, M., Rachev, N.R., Stoyanova, A., Schmidt, K., Suchow, J.W., Koptjevskaja-Tamm, M., Jernsäther, T., Olofsson, J.K., Bialobrzeska, O., Marszalek, M., Tatachari, S., Afhami, R., Law, W., Antfolk, J., Žuro, B., Van Doren, N., Soto, J.A., Searston, R., Miranda, J., Damnjanović, K., Yeung, S.K., Krupić, D., Hoyer, K., Jaeger, B., Ren, D., Pfuhl, G., Klevjer, K., Corral-Frías, N.S., Frias-Armenta, M., Lucas, M.Y., Torres, A.O., Toro, M., Delgado, L.G.J., Vega, D., Solas, S.Á., Vilar, R., Massoni, S., Frizzo, T., Bran, A., Vaidis, D.C., Vieira, L., Paris, B., Capizzi, M., Coelho, G.L.de.H., Greenburgh, A., Whitt, C.M., Tullett, A.M., Du, X., Volz, L., Bosma, M.J., Karaarslan, C., Sarıoğuz, E., Allred, T.B., Korbmacher, M., Colloff, M.F., Lima, T.J.S., Ribeiro, M.F.F., Verharen, J.P.H., Karekla, M., Karashiali, C., Sunami, N., Jaremka, L.M., Storage, D., Habib, S., Studzinska, A., Hanel, P.H.P., Holford, D.L., Sirota, M., Wolfe, K., Chiu, F., Theodoropoulou, A., Ahn, E.R., Lin, Y., Westgate, E.C., Brohmer, H., Hofer, G., Dujols, O., Vezirian, K., Feldman, G., Travaglino, G.A., Ahmed, A., Li, M., Bosch, J., Torunsky, N., Bai, H., Manavalan, M., Song, X., Walczak, R.B., Zdybek, P., Friedemann, M., Rosa, A.D., Kozma, L., Alves, S.G., Lins, S., Pinto, I.R., Correia, R.C., Babinčák, P., Banik, G., Rojas-Berscia, L.M., Varella, M.A.C., Uttley, J., Beshears, J.E., Thommesen, K.K., Behzadnia, B., Geniole, S.N., Silan, M.A., Maturan, P.L.G., Vilsmeier, J.K., Tran, U.S., Izquierdo, S.M., Mensink, M.C., Sorokowski, P., Groyecka-Bernard, A., Radtke, T., Adoric, V.C., Carpentier, J., Özdoğru, A.A., Joy-Gaba, J.A., Hedgebeth, M.V., Ishii, T., Wichman, A.L., Röer, J.P., Ostermann, T., Davis, W.E., Suter, L., Papachristopoulos, K., Zabel, C., Ebersole, C.R., Chartier, C.R., Mallik, P.R., Urry, H.L., Buchanan, E.M., Coles, N.A., Primbs, M.A., Basnight-Brown, D.M., IJzerman, H., Forscher, P.S. and Moshontz, H. (2021) A multi-country test of brief reappraisal interventions on emotions during the COVID-19 pandemic. Nature Human Behaviour, 5 . pp. 1089-1110.

Wei, G.Z., Martin, K.A., Xing, P.Y., Agrawal, R., Whiley, L.ORCID: 0000-0002-9088-4799, Wood, T.K., Hejndorf, S., Ng, Y.Z., Low, J.Z.Y., Rossant, J., Nechanitzky, R., Holmes, E., Nicholson, J.K., Tan, E-K, Matthews, P.M. and Pettersson, S. (2021) Tryptophan-metabolizing gut microbes regulate adult neurogenesis via the aryl hydrocarbon receptor. Proceedings of the National Academy of Sciences, 118 (27). Art. e2021091118.

Whiley, L.ORCID: 0000-0002-9088-4799, Chappell, K.E., D’Hondt, E., Lewis, M.R., Jiménez, B., Snowden, S.G., Soininen, H., Kłoszewska, I., Mecocci, P., Tsolaki, M., Vellas, B., Swann, J.R., Hye, A., Lovestone, S., Legido-Quigley, C. and Holmes, E. (2021) Metabolic phenotyping reveals a reduction in the bioavailability of serotonin and kynurenine pathway metabolites in both the urine and serum of individuals living with Alzheimer’s disease. Alzheimer's Research & Therapy, 13 (1). Art. 20.

Yang, R.ORCID: 0000-0003-2563-2015, Brice, B., Berto, B.P. and Ryan, U.ORCID: 0000-0003-2710-9324 (2021) Morphological and molecular description of a new species of Isospora (Apicomplexa) from a New Holland honeyeater (Phylidonyris novaehollandiae). Parasitology International, 83 . Art. 102348.

Yang, R.ORCID: 0000-0003-2563-2015, Brice, B., Liu, Q., Berto, B.P., Austen, J.ORCID: 0000-0002-1826-1634 and Ryan, U.M.ORCID: 0000-0003-2710-9324 (2021) Morphological and genetic characterization of the first Isospora species (I. lugensae n. sp.) from a Kerguelen petrel (Lugensa brevirostris). Parasitology Research .

2020

Abbiss, H., Gummer, J.P.A., Francki, M. and Trengove, R.D. (2020) Untargeted liquid chromatography-mass spectrometry-based metabolomics analysis of wheat grain. Journal of Visualized Experiments (157).

Abreu, T.C., Hulshof, P.J.M., Boshuizen, H.C., Trijsburg, L., Gray, N. and de Vries, J.H.M. (2020) Validity coefficient of repeated measurements of urinary marker of sugar intake is comparable to urinary nitrogen as marker of protein intake in Free-living subjects. Cancer Epidemiology Biomarkers & Prevention, 30 (1). pp. 193-202.

Chamberlain, C., Gee, G., Gartland, D., Mensah, F.K., Mares, S., Clark, Y., Ralph, N., Atkinson, C., Hirvonen, T., McLachlan, H., Edwards, T., Herrman, H., Brown, S.J. and Nicholson, J.M. (2020) Community perspectives of complex trauma assessment for Aboriginal parents: 'Its important, but how these discussions are held is critical'. Frontiers in Psychology, 11 . Art. 2014.

Ding, N.S., McDonald, J.A.K., Perdones-Montero, A., Rees, D.N., Adegbola, S.O., Misra, R., Hendy, P., Penez, L., Marchesi, J.R., Holmes, E., Sarafian, M.H. and Hart, A.L. (2020) Metabonomics and the gut microbiome associated with primary response to Anti-TNF therapy in Crohn’s Disease. Journal of Crohn's and Colitis, 14 (8). pp. 1090-1102.

Egan, S.L.ORCID: 0000-0003-4395-4069, Ruiz-Aravena, M., Austen, J.M.ORCID: 0000-0002-1826-1634, Barton, X.ORCID: 0000-0002-5783-4941, Comte, S., Hamilton, D.G., Hamede, R.K., Ryan, U.M.ORCID: 0000-0003-2710-9324, Irwin, P.J.ORCID: 0000-0002-0006-8262, Jones, M.E. and Oskam, C.L. (2020) Blood parasites in endangered wildlife - Trypanosomes discovered during a survey of haemoprotozoa from the Tasmanian devil. Pathogens, 9 (11). Article 873.

Elaskalani, O., Domenichini, A., Abdol Razak, N., E. Dye, D., Falasca, M. and Metharom, P. (2020) Antiplatelet drug ticagrelor enhances chemotherapeutic efficacy by targeting the novel P2Y12-AKT Pathway in pancreatic cancer cells. Cancers, 12 (1). Art. 250.

Gallagher, K., Catesson, A., Griffin, J.L., Holmes, E. and Williams, H.R.T. (2020) Metabolomic Analysis in Inflammatory Bowel Disease: A Systematic Review. Journal of Crohn's and Colitis, 15 (5). pp. 813-826.

Garcia-Perez, I., Posma, J.M., Serrano-Contreras, J.I., Boulangé, C.L., Chan, Q., Frost, G., Stamler, J., Elliott, P., Lindon, J.C., Holmes, E. and Nicholson, J.K. (2020) Identifying unknown metabolites using NMR-based metabolic profiling techniques. Nature Protocols, 15 . pp. 2538-2567.

Geia, L., Baird, K., Bail, K., Barclay, L., Bennett, J., Best, O., Birks, M., Blackley, L., Blackman, R., Bonner, A., Bryant AO, R., Buzzacott, C., Campbell, S., Catling, C., Chamberlain, C., Cox, L., Cross, W., Cruickshank, M., Cummins, A., Dahlen, H., Daly, J., Darbyshire, P., Davidson, P., Denney-Wilson, E., de Souza, R., Doyle, K., Drummond, A., Duff, J., Duffield, C., Dunning, T., East, L., Elliott, D., Elmir, R., Fergie OAM, D., Ferguson, C., Fernandez, R., Flower AM, D., Foureur, M., Fowler, C., Fry, M., Gorman, E., Grant, J., Gray, J., Halcomb, E., Hart, B., Hartz, D., Hazelton, M., Heaton, L., Hickman, L., Homer AO, C. S. E., Hungerford, C., Hutton, A., Jackson AO, D., Johnson, A., Kelly, M.A., Kitson, A., Knight, S., Levett-Jones, T., Lindsay, D., Lovett, R., Luck, L., Molloy, L., Manias, E., Mannix, J., Marriott, R.ORCID: 0000-0002-6037-2565, Martin, M., Massey, D., McCloughen, A., McGough, S., McGrath, L., Mills, J., Mitchell, B. G., Mohamed, J., Montayre, J., Moroney, T., Moyle, W., Moxham, L., Northam OAM, H., Nowlan, S., O'Brien, A. P., Ogunsiji, O., Paterson, C., Pennington, K., Peters, K., Phillips, J., Power, T., Procter, N., Ramjan, L., Ramsay, N., Rasmussen, B., Rihari-Thomas, J., Rind, B., Robinson, M., Roche, M., Sainsbury, K., Salamonson, Y., Sherwood, J., Shields, L., Sim, J., Skinner, I., Smallwood, G., Smallwood, R., Stewart, L., Taylor, S., Usher AM, K., Virdun, C., Wannell, J., Ward, R., West, C., West, R., Wilkes, L., Williams, R., Wilson, R., Wynaden, D. and Wynne, R. (2020) A unified call to action from Australian nursing and midwifery leaders: Ensuring that Black lives matter. Contemporary Nurse . Latest Article.

Gray, N., Gethings, L.A., Plumb, R.S. and Wilson, I.D. (2020) UHPLC-MS-Based lipidomic and metabonomic investigation of the metabolic phenotypes of wild type and hepatic CYP Reductase Null (HRN) mice. Journal of Pharmaceutical and Biomedical Analysis, 186 . Art. 113318.

Ham, K.A.ORCID: 0000-0002-7036-5334, Aung-Htut, M.T., Fletcher, S. and Wilton, S.D. (2020) Nonsequential splicing events alter antisense-mediated exon skipping outcome in COL7A1. International Journal of Molecular Sciences, 21 (20). Article 7705.

James, K., Bottacini, F., Contreras, J.I.S., Vigoureux, M., Egan, M., Motherway, M.O., Holmes, E. and van Sinderen, D. (2020) Author Correction: Metabolism of the predominant human milk oligosaccharide fucosyllactose by an infant gut commensal. Scientific Reports, 10 (1). Art. 17265.

Jamieson, N., Maple, M., Ratnarajah, D. and Usher, K. (2020) Military moral injury: A concept analysis. International Journal of Mental Health Nursing . Early View.

Kimhofer, T., Lodge, S., Whiley, L.ORCID: 0000-0002-9088-4799, Gray, N., Loo, R.L., Lawler, N.G., Nitschke, P., Bong, S-H, Morrison, D.L., Begum, S., Richards, T., Yeap, B.B., Smith, C., Smith, K.G.C., Holmes, E. and Nicholson, J.K. (2020) Integrative modeling of quantitative plasma lipoprotein, metabolic, and amino acid data reveals a multiorgan pathological signature of SARS-CoV-2 infection. Journal of Proteome Research, 19 (11). pp. 4442-4454.

Kotz, J., Marriott, R.ORCID: 0000-0002-6037-2565 and Reid, C. (2020) The EPDS and Australian Indigenous women: A systematic review of the literature. Women and Birth, 34 (2). e128-e134.

Koundouros, N., Karali, E., Tripp, A., Valle, A., Inglese, P., Perry, N.J.S., Magee, D.J., Anjomani Virmouni, S., Elder, G.A., Tyson, A.L., Dória, M.L., van Weverwijk, A., Soares, R.F., Isacke, C.M., Nicholson, J.K., Glen, R.C., Takats, Z. and Poulogiannis, G. (2020) Metabolic Fingerprinting Links Oncogenic PIK3CA with Enhanced Arachidonic Acid-Derived Eicosanoids. Cell, 181 (7). 1596-1611.e27.

Kurbatova, N., Garg, M., Whiley, L.ORCID: 0000-0002-9088-4799, Chekmeneva, E., Jiménez, B., Gómez-Romero, M., Pearce, J., Kimhofer, T., D’Hondt, E., Soininen, H., Kłoszewska, I., Mecocci, P., Tsolaki, M., Vellas, B., Aarsland, D., Nevado-Holgado, A., Liu, B., Snowden, S., Proitsi, P., Ashton, N.J., Hye, A., Legido-Quigley, C., Lewis, M.R., Nicholson, J.K., Holmes, E., Brazma, A. and Lovestone, S. (2020) Urinary metabolic phenotyping for Alzheimer’s disease. Scientific Reports, 10 (1). Art. 21745.

Lau, C.-H.E., Taylor-Bateman, V., Vorkas, P.A., Graça, G., Vu, T.-H.T., Hou, L., Chekmeneva, E., Ebbels, T.M.D., Chan, Q., Van Horn, L. and Holmes, E. (2020) Metabolic signatures of gestational weight gain and postpartum weight loss in a lifestyle intervention study of overweight and obese women. Metabolites, 10 (12). Article 498.

Letertre, M.P.M., Munjoma, N., Wolfer, K., Pechlivanis, A., McDonald, J.A.K., Hardwick, R.N., Cherrington, N.J., Coen, M., Nicholson, J.K., Hoyles, L., Swann, J.R. and Wilson, I.D. (2020) A Two-Way interaction between Methotrexate and the Gut Microbiota of Male Sprague–Dawley Rats. Journal of Proteome Research, 19 (8). pp. 3326-3339.

Loo, R.L., Chan, Q., Antti, H., Li, J.V., Ashrafian, H., Elliott, P., Stamler, J., Nicholson, J.K., Holmes, E., Wist, J. and Wren, J. (2020) Strategy for improved characterization of human metabolic phenotypes using a COmbined Multi-block principal components analysis with statistical spectroscopy (COMPASS). Bioinformatics, 36 (21). pp. 5229-5236.

Loo, R.L., Lodge, S., Kimhofer, T., Bong, S-H, Begum, S., Whiley, L.ORCID: 0000-0002-9088-4799, Gray, N., Lindon, J.C., Nitschke, P., Lawler, N.G., Schäfer, H., Spraul, M., Richards, T., Nicholson, J.K. and Holmes, E. (2020) Quantitative in-vitro diagnostic NMR spectroscopy for lipoprotein and metabolite measurements in plasma and serum: Recommendations for analytical artifact minimization with special reference to COVID-19/SARS-CoV-2 Samples. Journal of Proteome Research, 19 (11). pp. 4428-4441.

Martinez-Gili, L., McDonald, J.A.K., Liu, Z., Kao, D., Allegretti, J.R., Monaghan, T.M., Barker, G.F., Miguéns Blanco, J., Williams, H.R.T., Holmes, E., Thursz, M.R., Marchesi, J.R. and Mullish, B.H. (2020) Understanding the mechanisms of efficacy of fecal microbiota transplant in treating recurrent Clostridioides difficile infection and beyond: the contribution of gut microbial-derived metabolites. Gut Microbes, 12 (1). Art. 1810531.

Thøgersen, R., Castro-Mejía, J.L., Kræmer Sundekilde, U., Hansen, L.H., Gray, N., Kuhnle, G., Jørgensen, N.R., Hansen, A.K., Nielsen, D.S. and Bertram, H.C. (2020) Inulin and milk mineral fortification of a pork sausage exhibits distinct effects on the microbiome and biochemical activity in the gut of healthy rats. Food Chemistry, 331 . Art. 127291.

Vonhof, E.V., Piotto, M., Holmes, E., Lindon, J.C., Nicholson, J.K. and Li, J.V. (2020) Improved spatial resolution of metabolites in tissue biopsies using high-resolution Magic-Angle-Spinning slice localization NMR spectroscopy. Analytical Chemistry, 92 (17). pp. 11516-11519.

Whife, C.J., Vallence, A-MORCID: 0000-0001-9190-6366, Edgar, D.W. and Wood, F.M. (2020) Decreased neuroplasticity in minor burn injury survivors compared to non-injured adults: A pilot study in burn injury survivors aged 45 years and older. Burns, 47 (2). pp. 327-337.

Yang, R.ORCID: 0000-0003-2563-2015, Brice, B., Berto, B.P. and Ryan, U.M.ORCID: 0000-0003-2710-9324 (2020) Morphological and genetic characterization of Eimeria chalcoptereae n. sp. (Apicomplexa: Eimeriidae) in a common bronzewing pigeon (Phaps chalcoptera) (Latham, 1790) in Western Australia. Parasitology Research .

This list was generated on Wed Sep 22 07:54:16 2021 UTC.