Publications: Jones, Michael

2013

Tan, J.C.H., Jones, M.G.K. and Fosu-Nyarko, J. (2013) Gene silencing in root lesion nematodes (Pratylenchus spp.) significantly reduces reproduction in a plant host. Experimental Parasitology, 133 (2). pp. 166-178.

2012

Wylie, S.J., Tan, A.J.Y., Li, H., Dixon, K.W. and Jones, M.G.K. (2012) Caladenia virus A, an unusual new member of the family Potyviridae from terrestrial orchids in Western Australia. Archives of Virology, 157 (12). pp. 2447-2452.

Wylie, S.J. and Jones, M.G.K. (2012) Complete genome sequences of seven carlavirus and potyvirus isolates from Narcissus and Hippeastrum plants in Australia, and proposals to clarify their naming. Archives of Virology, 157 (8). pp. 1471-1480.

Nicol, P., Gill, Reetinder, Fosu-Nyarko, J. and Jones, M.G.K. (2012) De novo analysis and functional classification of the transcriptome of the root lesion nematode, Pratylenchus thornei, after 454 GS FLX sequencing. International Journal for Parasitology, 42 (3). pp. 225-237.

Wylie, S.J., Li, H. and Jones, M.G.K. (2012) First report of an isolate of Japanese iris necrotic ring virus from Australia. Australasian Plant Disease Notes, 7 (1). pp. 107-110.

Wylie, S.J., Luo, H., Li, H. and Jones, M.G.K. (2012) Multiple polyadenylated RNA viruses detected in pooled cultivated and wild plant samples. Archives of Virology, 157 (2). pp. 271-284.

Wylie, S.J., Li, H. and Jones, M.G.K. (2012) Phylogenetic analysis of allexiviruses identified on garlic from Australia. Australasian Plant Disease Notes, 7 (1). pp. 23-27.

2011

Wylie, S.J. and Jones, M.G.K. (2011) Characterisation and quantitation of mutant and wild-type genomes of Hardenbergia mosaic virus isolates co-infecting a wild plant of Hardenbergia comptoniana. Archives of Virology, 156 (7). pp. 1251-1255.

Zhang, X-Q, Li, C., Panozzo, J., Westcott, S., Zhang, G., Tay, A., Appels, R., Jones, M. and Lance, R. (2011) Dissecting the telomere region of barley chromosome 5HL using rice genomic sequences as references: new markers for tracking a complex region in breeding. Molecular Breeding, 27 (1). pp. 1-9.

Cakir, M., Gupta, S., Li, C., Hayden, M., Mather, D.E., Ablett, G.A., Platz, G.J., Broughton, S., Chalmers, K.J., Loughman, R., Jones, M.G.K. and Lance, R.C.M. (2011) Genetic mapping and QTL analysis of disease resistance traits in the barley population Baudin x AC Metcalfe. Crop & Pasture Science, 62 (2). pp. 152-161.

Wylie, S. and Jones, M. (2011) Hardenbergia virus A, a novel member of the family Betaflexiviridae from a wild legume in Southwest Australia. Archives of Virology, 156 (7). pp. 1245-1250.

Liu, F., Gupta, S., Zhang, X-Q, Jones, M., Loughman, R., Lance, R. and Li, C. (2011) PCR markers for selection of adult plant leaf rust resistance in barley (Hordeum vulgare L.). Molecular Breeding, 28 (4). pp. 657-666.

Saqib, M., Gadja, B.E., Jones, M.G.K. and Jones, R.A.C. (2011) Virus symptomatology in accessions of the Medicago truncatula core collection and identification of virus resistance phenotypes. Crop and Pasture Science, 62 (8). pp. 686-700.

Wylie, S.J. and Jones, M.G.K. (2011) The complete genome sequence of a Passion fruit woodiness virus isolate from Australia determined using deep sequencing, and its relationship to other potyviruses. Archives of Virology, 156 (3). pp. 479-482.

Luo, H., Wylie, S.J., Coutts, B., Jones, R.A.C. and Jones, M.G.K. (2011) A virus of an isolated indigenous flora spreads naturally to an introduced crop species. Annals of Applied Biology, 159 (3). pp. 339-347.

2010

Fosu-Nyarko, J., Jones, M.G.K. and Wang, Z. (2010) Application of Laser Microdissection to Study Plant–Fungal Pathogen Interactions. Methods in molecular biology, 638 . pp. 153-163.

Tan, J.C.H., Fosu-Nyarko, J. and Jones, M.G.K. (2010) Application of gene silencing for nematode control. In: Plant Health & Protection Research Symposium, 29 October, Perth, Western Australia.

Lee, E., Wylie, S.J. and Jones, M.G.K. (2010) First report of 'Candidatus Phytoplasma aurantifolia' associated with severe stunting and necrosis on the invasive weed Pelargonium capitatum in Western Australia. Plant Disease, 94 (10). p. 1264.

Chamberlain, K., Saqib, M. and Jones, M.G.K. (2010) Gene expression and metabolite changes of tomato plants in response to Candidatus Phytoplasma infection. In: 9th Australasian Plant Virology Workshop, 16-19 November 2010, Melbourne, Vic..

Saqib, M., Nouri, S., Cayford, B., Jones, R.A.C. and Jones, M.G.K. (2010) Genome sequences and phylogenetic placement of two isolates ofBean common mosaic virusfromMacroptilium atropurpureumin north-west Australia. Australasian Plant Pathology, 39 (2). pp. 184-191.

Luo, H., Wylie, S.J. and Jones, M.G.K. (2010) Identification of plant viruses using one-dimensional gel electrophoresis and peptide mass fingerprints. Journal of Virological Methods, 165 (2). pp. 297-301.

Wylie, S.J., Nouri, S., Coutts, B.A. and Jones, M.G.K. (2010) Narcissus late season yellows virus and Vallota speciosa virus found infecting domestic and wild populations of Narcissus species in Australia. Archives of Virology, 155 (7). pp. 1171-1174.

Tan, M.N.H., Vanstone, V.A. and Jones, M.G.K. (2010) Novel molecular diagnostic frame work for plant parasitic nematode pest of plant biosecurity concern-better and faster than classical taxonomy? In: Plant Health & Protection Research Symposium, 29 October, Perth, Western Australia.

2009

Wasson, A.P., Ramsay, K., Jones, M.G.K. and Mathesius, U. (2009) Differing requirements for flavonoids during the formation of lateral roots, nodules and root knot nematode galls inMedicago truncatula. New Phytologist, 183 (1). pp. 167-179.

Fosu-Nyarko, J., Jones, M.G.K. and Wang, Z. (2009) Functional characterization of transcripts expressed in early-stageMeloidogyne javanica-induced giant cells isolated by laser microdissection. Molecular Plant Pathology, 10 (2). pp. 237-248.

Perera, M.R., Taylor, S., Vanstone, V. and Jones, M.G.K. (2009) Protein biomarkers to distinguish oat and lucerne races of the stem nematode, Ditylenchus dipsaci, with quarantine significance for Western Australia. Nematology, 11 (4). pp. 555-563.

Saqib, M., Ellwood, S.R., Jones, R.A.C. and Jones, M.G.K. (2009) Resistance to Subterranean clover mottle virus in Medicago truncatula and genetic mapping of a resistance locus. Crop and Pasture Science, 60 (5). pp. 480-489.

Mortimer-Jones, S.M., Jones, M.G.K., Jones, R.A.C., Thomson, G. and Dwyer, G.I. (2009) A single tube, quantitative real-time RT-PCR assay that detects four potato viruses simultaneously. Journal of Virological Methods, 161 (2). pp. 289-296.

2008

Saqib, M., Nouri, S., Jones, R.A.C. and Jones, M.G.K. (2008) First full length sequence of Bean common mosaic virus from Australia. In: 8th Australasian Plant Virology Workshop, 19-22 November 2008, Rotorua, New Zealand.

Saqib, M., Ellwood, S.R., Jones, R.A.C. and Jones, M.G.K. (2008) Mapping a SCMoV resistance gene in Medicago truncatula. In: International conference on Molecular Mapping and Marker Assisted Selection in Plants, 3-6 February 2008, Vienna, Austria.

Wylie, S.J., Coutts, B.A., Jones, M.G.K. and Jones, R.A.C. (2008) Phylogenetic analysis of Bean yellow mosaic virus isolates from four continents: Relationship between the seven groups found and their hosts and origins. Plant Disease, 92 (12). pp. 1596-1603.

2007

Webster, C.G., Coutts, B.A., Jones, R.A.C., Jones, M.G.K. and Wylie, S.J. (2007) Virus impact at the interface of an ancient ecosystem and a recent agroecosystem: studies on three legume-infecting potyviruses in the southwest Australian floristic region. Plant Pathology, 56 (5). pp. 729-742.

Saqib, M., Smith, B.D., Parrish, J.L., Ramsdale, R.A. and Jones, M.G.K. (2007) Detection of phytoplasma in Allocasurina fraseriana and Acacia saligna in Kings Park. Journal of the Royal Society of Western Australia, 90 (4). pp. 175-178.

Saqib, M., Ellwood, S.R., Jones, R.A.C. and Jones, M.G.K. (2007) Mapping a SCMoV resistance gene in Medicago truncatula. In: Australian Centre for Plant Functional Genomics Symposium, 22-24 October 2007, Adelaide, South Australia.

Singh, Meenu, Saqib, M. and Jones, M.G.K. (2007) Production of recombinant antigens against Jembrana Disease virus in plants to control Jembrana disease and study their immunogenic response. In: The 4th Scientific Meeting of the Australian Virology Group, 9-13 December 2007, Fraser Island, Queensland.

2006

Saqib, M., Jones, M.G.K. and Jones, R.A.C. (2006) 'Candidatus Phytoplasma australiense' is associated with diseases of red clover and paddy melon in south-west Australia. Australasian Plant Pathology, 35 (2). pp. 283-285.

Kammerer, M., Jones, M.G.K. and Saqib, M. (2006) Characterisation and phylogenetic analysis of phytoplasma-affected Paulownia. In: 7th Australasian Plant Virology Workshop , 8-11 November 2006, Perth, Western Australia.

Moolhuijzen, P., Cakir, M., Hunter, A., Schibeci, D., Macgregor, A., Smith, C., Francki, M., Jones, M.G.K., Appels, R. and Bellgard, M. (2006) Erratum: LegumeDB bioinformatics resource: comparative genomic analysis and novel cross genera marker identification in lupin and pasture legume species. Genome, 49 (9). pp. 1206-1207.

Saqib, M., Ramsdale, R.A., Jones, R.A.C. and Jones, M.G.K. (2006) Identification of phytoplasma-associated disease in native and cultivated plants from Western Australia. In: 7th Australasian Plant Virology Workshop, 8-11 November 2006, Perth, Western Australia.

Saqib, M., Bayliss, K.L. and Jones, M.G.K. (2006) Identification of sweet potato little leaf phytoplasma associated with Vigna unguiculata var. sesquipedalis and Lycopersicon esculentum. Australasian Plant Pathology, 35 (3). pp. 293-296.

Saqib, M., Gajda, E., Jones, R.A.C. and Jones, M.G.K. (2006) Identifying sources of resistance to three viruses within the core collection of the model legume Medicago truncatula. In: 7th Australasian Plant Virology Workshop, 8-11 November 2006, Perth, Western Australia.

Ramsay, K., Jones, M.G.K. and Wang, Z. (2006) Laser capture microdissection: A novel approach to microanalysis of plant?microbe interactions. Molecular Plant Pathology, 7 (5). pp. 429-435.

Moolhuijzen, P., Cakir, M., Hunter, A., Schibeci, D., Macgregor, A., Smith, C., Francki, M., Jones, M.G.K., Appels, R. and Bellgard, M. (2006) LegumeDB1 bioinformatics resource: comparative genomic analysis and novel cross-genera marker identification in lupin and pasture legume species. Genome, 49 (6). pp. 689-699.

Saqib, M., Ellwood, S.R., Jones, R.A.C. and Jones, M.G.K. (2006) Mapping a SCMoV resistance gene in Medicago truncatula. In: 7th Australasian Plant Virology Workshop, 8-11 November 2006, Perth, Western Australia.

Li, C., Lance, R., Tarr, A., Harasymow, S., Gupta, S., Cakir, M., Jones, M.G.K. and Appels, R. (2006) Marker assisted breeding in barley: the winners and the losers. In: 13th Australasian Plant Breeding Conference, 18 - 21 April, Christchurch, New Zealand .

Gupta, S., Li, C., Cakir, M., Loughman, R., Lance, R., Appels, R. and Jones, M.G.K. (2006) Resistances for leaf blight diseases in barley populations. In: 3rd International Workshop on Barley Leaf Blights, 23 - 27 July, Edmonton, AB, Canada.

Nelson, M.N., Phan, H.T.T., Ellwood, S.R., Moolhuijzen, P.M., Hane, J.K., Williams, A., O‘Lone, C.E., Fosu-Nyarko, J., Scobie, M., Cakir, M., Jones, M.G.K., Bellgard, M., Książkiewicz, M., Wolko, B., Barker, S., Oliver, R.P. and Cowling, W.A. (2006) The first gene-based map of Lupinus angustifolius L.-location of domestication genes and conserved synteny with Medicago truncatula. Theoretical and Applied Genetics, 113 (2). pp. 225-238.

2005

Bayliss, K.L., Saqib, M., Dell, B., Jones, M.G.K. and Hardy, G.E.St.J. (2005) First record of 'Candidatus Phytoplasma australiense' in Paulownia trees. Australasian Plant Pathology, 34 (1). pp. 123-124.

Saqib, M., Bayliss, K.L., Dell, B., Hardy, G.E.St.J. and Jones, M.G.K. (2005) First record of a phytoplasma-associated disease of chickpea (Cicer arietinum) in Australia. Australasian Plant Pathology, 34 (3). pp. 425-426.

Saqib, M., Jones, R.A.C., Cayford, B. and Jones, M.G.K. (2005) First report of Bean common mosaic virus in Western Australia. Plant Pathology, 54 (4). p. 563.

Perera, M.R., Vargas, R.D.F. and Jones, M.G.K. (2005) Identification of aphid species using protein profiling and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Entomologia Experimentalis et Applicata, 117 (3). pp. 243-247.

Perera, M.R., Bayliss, K.L. and Jones, M.G.K. (2005) New Australian record for infection of trees in Paulownia plantations by root-knot nematodes. Australasian Plant Pathology, 34 (3). pp. 419-420.

Saqib, M., Fosu-Nyarko, J., Jones, R.A.C. and Jones, M.G.K. (2005) Screening of the core Medicago truncatula collection against four viruses: AMV, CMV, SCMoV, and BYMV. In: 2nd Australian Model Legume Workshop, 5-8 April 2005, Perth, Western Australia.

2004

Webster, C.G., Wylie, S.J. and Jones, M.G.K. (2004) Diagnosis of plant viral pathogens. Current Science, 86 (12). pp. 1604-1607.

Saqib, M., Fosu-Nyarko, J., Smith, T., Wylie, S., Jones, R.A.C. and Jones, M.G.K. (2004) Screening of the core Medicago truncatula collection against four viruses: AMV, CMV, SCMoV, and BYMV. In: 6th Australian Plant Virology Workshop, 30 August - 2 September 2004, Gold Coast, Queensland.

2003

Cakir, M., Gupta, S., Platz, G.J., Ablett, G.A., Loughman, R., Emebiri, L.C., Poulsen, D., Li, C.D., Lance, R.C.M., Galwey, N.W., Jones, M.G.K. and Appels, R. (2003) Mapping and validation of the genes for resistance to Pyrenophora teres f. teres in barley (Hordeum vulgare L.). Australian Journal of Agricultural Research, 54 (12). pp. 1369-1377.

Dwyer, G.I., Njeru, R., Williamson, S., Fosu-Nyarko, J., Hopkins, R., Jones, R.A.C., Waterhouse, P.M. and Jones, M.G.K. (2003) The complete nucleotide sequence of Subterranean clover mottle virus. Archives of Virology, 148 (11). pp. 2237-2247.

2002

Gupta, S., Loughman, R., Cakir, M., Platz, G., Li, C., Lance, R., Jones, M. and Appels, R. (2002) Genetic and molecular studies of seedling and adult plant resistance in barley against Pyrenophora teres f. teres. In: 2nd International Barley Leaf Blight Workshop , 7 - 11 April, ICARDA, Aleppo, Syria.

Fosu-Nyarko, J., Jones, R.A.C., Smith, L.J., Jones, M.G.K. and Dwyer, G.I. (2002) Host range and symptomatology of Subterranean clover mottle virus in alternative pasture, forage and crop legumes. Australasian Plant Pathology, 31 (4). pp. 345-350.

Wylie, S.J., Kueh, J., Welsh, B., Smith, L.J., Jones, M.G.K. and Jones, R.A.C. (2002) A non-aphid-transmissible isolate of bean yellow mosaic potyvirus has an altered NAG motif in its coat protein. Archives of Virology, 147 (9). pp. 1813-1820.

2000

Saqib, M., Jones, J.B., Cayford, B. and Jones, M.G.K. (2000) First report of Bean common mosaic potyvirus in Western Australia. New Disease Reports, 10 . p. 43.

Gupta, S., Loughman, R., Platz, G., Lance, R. and Jones, M.G.K. (2000) Genetics of net-type net blotch (Pyrenophora teres f. sp. teres) resistance in barley against Australian pathotypes. In: Barley genetics VIII : proceedings of the 8th International Barley Genetics Symposium, 22 - 27 October, Adelaide, South Australia.

1999

Gupta, S., Loughman, R., Lance, R. and Jones, M. (1999) Resistance to Pyrenophora teres in barley. In: 9th Australian Barley Technical Symposium, 12 - 16 September, Melbourne, Australia.

1998

Atkins, C.A., Smith, P.M.C., Gupta, S., Jones, M.G.K. and Caligari, P.D.S. (1998) Genetics, cytology and biotechnology. In: Gladstones, J.S., Atkins, C. and Hamblin, C., (eds.) Lupins as Crop Plants: Biology, Production and Utilization. CABI International, Wallingford, Oxon, UK, pp. 67-92.