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Publications: Dunn, David

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Number of items: 32.

Journal Article

Tschochner, M., Leary, S., Cooper, D., Strautins, K., Chopra, A., Clark, H., Choo, L., Dunn, D., James, I., Carroll, W.M., Kermode, A.G. and Nolan, D. (2016) Identifying Patient-Specific Epstein-Barr nuclear antigen-1 genetic variation and potential autoreactive targets relevant to multiple sclerosis pathogenesis. PloS one, 11 (2).

Strautins, K., Tschochner, M., James, I., Choo, L., Dunn, D., Pedrini, M., Kermode, A., Carroll, W. and Nolan, D. (2014) Combining HLA-DR risk alleles and anti-Epstein-Barr virus antibody profiles to stratify multiple sclerosis risks. Multiple Sclerosis Journal, 20 (3). pp. 286-294.

Keane, N.M., Pavlos, R.K., McKinnon, E., Lucas, A., Rive, C., Blyth, C.C., Dunn, D., Lucas, M., Mallal, S. and Phillips, E. (2014) HLA Class I restricted CD8+ and Class II restricted CD4+ T cells are implicated in the pathogenesis of nevirapine hypersensitivity. AIDS, 28 (13). pp. 1891-1901.

Phillips, E., Bartlett, J.A., Sanne, I., Lederman, M.M., Hinkle, J., Rousseau, F., Dunn, D., Pavlos, R., James, I., Mallal, S.A. and Haas, D.W. (2013) Associations between HLA-DRB1*0102, HLA-B*5801, and hepatotoxicity during initiation of nevirapine-containing regimens in South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 62 (2). e55-e57.

Suppiah, V., Gaudieri, S., Armstrong, N.J., O'Connor, K.S., Berg, T., Weltman, M., Abate, M.L., Spengler, U., Bassendine, M., Dore, G.J., Irving, W.L., Powell, E., Hellard, M., Riordan, S., Matthews, G., Sheridan, D., Nattermann, J., Smedile, A., Müller, T., Hammond, E., Dunn, D.S., Negro, F., Bochud, P-Y, Mallal, S., Ahlenstiel, G., Stewart, G.J., George, J. and Booth, D.R. (2011) IL28B, HLA-C, and KIR variants additively predict response to therapy in chronic Hepatitis C virus infection in a European cohort: A cross-sectional study. PLoS Medicine, 8 (9). e1001092.

Breen, J., Li, D., Dunn, D.S., Bekes, F., Kong, X., Zhang, J., Jia, J., Wicker, T., Mago, R., Ma, W., Bellgard, M. and Appels, R. (2010) Wheat beta-expansin (EXPB11) genes: Identification of the expressed gene on chromosome 3BS carrying a pollen allergen domain. BMC Plant Biology, 10 (1). p. 99.

Moolhuijzen, P., Kulski, J.K., Dunn, D.S., Schibeci, D., Barrero, R., Gojobori, T. and Bellgard, M. (2010) The transcript repeat element: the human Alu sequence as a component of gene networks influencing cancer. Functional & Integrative Genomics, 10 (3). pp. 307-319.

Bellgard, M., Wanchanthuek, P., La, T., Ryan, K., Moolhuijzen, P., Albertyn, Z., Shaban, B., Motro, Y., Dunn, D.S., Schibeci, D., Hunter, A., Barrero, R., Phillips, N.D. and Hampson, D.J. (2009) Genome sequence of the pathogenic intestinal spirochete Brachyspira hyodysenteriae reveals adaptations to its lifestyle in the porcine large intestine. PLoS ONE, 4 (3). e4641.

Motro, Y., La, T., Bellgard, M., Dunn, D.S., Phillips, N.D. and Hampson, D.J. (2009) Identification of genes associated with prophage-like gene transfer agents in the pathogenic intestinal spirochaetes Brachyspira hyodysenteriae, Brachyspira pilosicoli and Brachyspira intermedia. Veterinary Microbiology, 134 (3-4). pp. 340-345.

McNeil, M.D., Kota, R., Paux, E., Dunn, D., McLean, R., Feuillet, C., Li, D., Kong, X., Lagudah, E., Zhang, J.C., Jia, J.Z., Spielmeyer, W., Bellgard, M. and Appels, R. (2008) BAC-derived markers for assaying the stem rust resistance gene, Sr2, in wheat breeding programs. Molecular Breeding, 22 (1). pp. 15-24.

Motro, Y., Dunn, D.S., La, T., Phillips, N.D., Hampson, D.J. and Bellgard, M.I. (2008) Intestinal spirochaetes of the genus Brachyspira share a partially conserved 26 kilobase genomic region with Enterococcus faecalis and Escherichia coli. Microbiology Insights, 1 . pp. 3-11.

Dunn, D.S., Choy, M.K., Phipps, M.E. and Kulski, J.K. (2007) The distribution of major histocompatibility complex class I polymorphic Alu insertions and their associations with HLA alleles in a Chinese population from Malaysia. Tissue Antigens, 70 (2). pp. 136-143.

Rasback, T., Johansson, K-E, Jansson, D.S., Fellstrom, C., Alikhani, M.Y., La, T., Dunn, D.S. and Hampson, D.J. (2007) Development of a multilocus sequence typing scheme for intestinal spirochaetes within the genus Brachyspira. Microbiology, 153 (12). pp. 4074-4087.

Moolhuijzen, P., Dunn, D.S., Bellgard, M., Carter, M., Jia, J., Kong, X., Gill, B.S., Feuillet, C., Breen, J. and Appels, R. (2007) Wheat genome structure and function: genome sequence data and the International Wheat Genome Sequencing Consortium. Australian Journal of Agricultural Research, 58 (6). pp. 470-475.

Greene, W.K., Sontani, Y., Sharp, M.A., Dunn, D.S., Kees, U.R. and Bellgard, M.I. (2007) A promoter with bidirectional activity is located between TLX1/HOX11 and a divergently transcribed novel human gene. Gene, 391 (1-2). pp. 223-232.

Binnewies, T.T., Motro, Y., Hallin, P.F., Lund, O., Dunn, D., La, T., Hampson, D.J., Bellgard, M., Wassenaar, T.M. and Ussery, D.W. (2006) Ten years of bacterial genome sequencing: comparative-genomics-based discoveries. Functional & Integrative Genomics, 6 (3). pp. 165-185.

Dunn, D.S., Inoko, H. and Kulski, J.K. (2006) The association between non-melanoma skin cancer and a young dimorphic Alu element within the major histocompatibility complex class I genomic region. Tissue Antigens, 68 (2). pp. 127-134.

Dunn, D.S., Romphruk, A.V., Leelayuwat, C., Bellgard, M. and Kulski, J.K. (2005) Polymorphic Alu insertions and their associations with MHC class I alleles and haplotypes in the Northeastern Thais. Annals of Human Genetics, 69 (4). pp. 364-372.

Kulski, J.K. and Dunn, D.S. (2005) Polymorphic Alu insertions within the Major Histocompatibility Complex class I genomic region: a brief review. Cytogenetic and Genome Research, 110 (1-4). pp. 193-202.

Dunn, D.S., Tait, B.D. and Kulski, J.K. (2005) The distribution of polymorphic Alu insertions within the MHC class I HLA-B7 and HLA-B57 haplotypes. Immunogenetics, 56 (10). pp. 765-768.

Dunn, D.S., Ota, M., Inoko, H. and Kulski, J.K. (2003) Association of MHC dimorphic Alu insertions with HLA class I and MIC genes in Japanese HLA-B48 haplotypes. Tissue Antigens, 62 (3). pp. 259-262.

Dunn, D.S., Inoko, H. and Kulski, J.K. (2003) Dimorphic Alu element located between the TFIIH and CDSN genes within the major histocompatibility complex. Electrophoresis, 24 (16). pp. 2740-2748.

Kulski, J.K., Lim, C.P.K., Dunn, D.S. and Bellgard, M. (2003) Genomic and phylogenetic analysis of the S100A7 (Psoriasin) gene duplications within the region of the S100 gene cluster on human chromosome 1q21. Journal of Molecular Evolution, 56 (4). pp. 397-406.

Kulski, J.K., Dunn, D.S., Hui, J., Martinez, P., Romphruk, A.V., Leelayuwat, C., Tay, G.K., Oka, A. and Inoko, H. (2002) Alu polymorphism within the MICB gene and association with HLA-B alleles. Immunogenetics, 53 (10-11). pp. 975-979.

Kulski, J.K., Dunn, D.S., Hui, J., Martinez, P., Romphruk, A.V., Leelayuwat, C., Tay, G.K., Oka, A. and Inoko, H. (2002) Alu polymorphism within the MICB gene and association with HLA-B alleles (Erratum). Immunogenetics, 54 (5). p. 365.

Dunn, D.S., Naruse, T., Inoko, H. and Kulski, J.K. (2002) The association between HLA-A alleles and young Alu dimorphisms near the HLA-J, -H, and -F genes in workshop cell lines and Japanese and Australian populations. Journal of Molecular Evolution, 55 (6). pp. 718-726.

Kulski, J.K., Dunn, D.S., Gaudieri, S., Shiina, T. and Inoko, H. (2001) Genomic and phylogenetic analysis of the human CD1 and HLA class I multicopy genes. Journal of Molecular Evolution, 53 (6). pp. 642-650.

Conference Paper

Cooper, D., Chopra, A., Blinco, J., Sharma, L., Dunn, D., Watson, M. and Mallal, S. (2014) HLA typing from second generation sequencing data – where are we headed? In: Asia Pacific Histocompatibility & Immunogenetics Association Conference, 15 - 19 November 2014, Peter Doherty Institute, Melbourne

Conference Item

Tschochner, M., Strautins, K., James, I., Leary, S., Choo, L., Clark, H., Dunn, D., Chopra, A., Cooper, D., Kermode, A., Carroll, W. and Nolan, D. (2016) Contribution of EBV infection to Multiple Sclerosis Pathogenesis: Human leukocyte antigen restricted, EBV epitope-specific T cell responses in Multiple Sclerosis. In: Science on the Swan 2016, 2 - 5 May 2016, Perth, Western Australia.

Chopra, A., Cooper, D., Sharma, L., Choo, L., Blinco, J., Dunn, D., Leary, S., Watson, M. and Mallal, S. (2012) High throughput HLA sequence-based typing using Next Generation Sequencing. In: 22nd Annual Combined Biological Sciences Meeting, 24 August 2012, University of Western Australia, Perth.

Black, M.L., Dunn, D., Tangtulyangkul, P., Hunter, A., Bellgard, M. and Bittles, A.H. (2008) Combining bioinformatics and population genetics in the study of Thalassaemia. In: International Conference on Medical and Community Genetics, 15 - 17 February, Chandigarh, India.


Dunn, David Suliman (2005) Studies on polymorphic alu insertions and genomic diversity within the major histocompatibility complex. PhD thesis, Murdoch University.

This list was generated on Fri Oct 20 19:56:11 2017 UTC.