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High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556T

De Meyer, S.E., Tian, R., Seshadri, R., Ivanova, N., Pati, A., Markowitz, V., Woyke, T., Yates, R., Howieson, J., Kyrpides, N. and Reeve, W. (2015) High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556T. Standards in Genomic Sciences, 10 (1).

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Abstract

Burkholderia dilworthii strain WSM3556T is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective N2-fixing root nodule of Lebeckia ambigua collected near Grotto Bay Nature Reserve, in the Western Cape of South Africa, in October 2004. This plant persists in infertile and deep sandy soils with acidic pH, and is therefore an ideal candidate for a perennial based agriculture system in Western Australia. WSM3556T thus represents a potential inoculant quality strain for L. ambigua for which we describe the general features, together with genome sequence and annotation. The 7,679,067 bp high-quality permanent draft genome is arranged in 140 scaffolds of 141 contigs, contains 7,059 protein-coding genes and 64 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

Publication Type: Journal Article
Murdoch Affiliation: Centre for Rhizobium Studies
Publisher: BioMed Central
Copyright: © 2015 De Meyer et al.
URI: http://researchrepository.murdoch.edu.au/id/eprint/28494
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